RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MPC2P38857 129 aa4.47□□□□□ -1.69
VPS4YPR173C PMP3P87284 55 aa4.47□□□□□ -1.69
VPS4YPR173C MRPS8Q03799 155 aa4.47□□□□□ -1.69
VPS4YPR173C SPG4Q04438 115 aa4.47□□□□□ -1.69
VPS4YPR173C HOR7Q05827 59 aa4.47□□□□□ -1.69
VPS4YPR173C SHH4Q06236 168 aa4.47□□□□□ -1.69
VPS4YPR173C SPO24Q3E752 67 aa4.47□□□□□ -1.69
VPS4YPR173C TMC1Q08422 150 aaPredicted RBP4.46□□□□□ -1.69
VPS4YPR173C PPT2Q12036 173 aa4.46□□□□□ -1.69
VPS4YPR173C EMC6Q12431 108 aa4.46□□□□□ -1.69
VPS4YPR173C YOR020W-AQ3E824 90 aa4.46□□□□□ -1.69
VPS4YPR173C YAR029WP39549 74 aa4.46□□□□□ -1.7
VPS4YPR173C YIL059CP40520 121 aa4.46□□□□□ -1.7
VPS4YPR173C YPL038W-AQ3E7B4 63 aa4.46□□□□□ -1.7
VPS4YPR173C TOR1P35169 2470 aa4.45□□□□□ -1.7
VPS4YPR173C UBC5P15732 148 aa4.45□□□□□ -1.7
VPS4YPR173C COX14P39103 70 aa4.45□□□□□ -1.7
VPS4YPR173C ARC15P40518 154 aaRIP-Chip data4.45□□□□□ -1.7not detected
VPS4YPR173C RPR2P40571 144 aa4.45□□□□□ -1.7
VPS4YPR173C YLR361C-AQ3E795 98 aa4.45□□□□□ -1.7
VPS4YPR173C KRE9P39005 276 aa4.44□□□□□ -1.7
VPS4YPR173C YFR035CP43608 114 aa4.44□□□□□ -1.7
VPS4YPR173C YMR295CQ03559 197 aa4.44□□□□□ -1.7
VPS4YPR173C YDR029WQ12111 104 aa4.44□□□□□ -1.7
VPS4YPR173C ECM12O13529 151 aa4.43□□□□□ -1.7
VPS4YPR173C TOM6P33448 61 aa4.43□□□□□ -1.7
VPS4YPR173C KNH1P50112 268 aa4.43□□□□□ -1.7
VPS4YPR173C IRA2P19158 3079 aa4.42□□□□□ -1.7
VPS4YPR173C YLR236CA0A023PZG4 107 aa4.42□□□□□ -1.7
VPS4YPR173C RPL2AP0CX45 254 aaKnown RBP4.42□□□□□ -1.7
VPS4YPR173C RPL2BP0CX46 254 aaKnown RBP4.42□□□□□ -1.7
VPS4YPR173C RPS11AP0CX47 156 aaKnown RBP4.42□□□□□ -1.7
VPS4YPR173C RPS11BP0CX48 156 aaKnown RBP4.42□□□□□ -1.7
VPS4YPR173C YJR107C-AP0CT86 78 aa4.41□□□□□ -1.7
VPS4YPR173C HOT13P36078 116 aa4.41□□□□□ -1.7
VPS4YPR173C YSY6P38374 65 aa4.41□□□□□ -1.7
VPS4YPR173C ALG13P53178 202 aa4.41□□□□□ -1.7
VPS4YPR173C SRL1Q08673 210 aa4.41□□□□□ -1.7
VPS4YPR173C YNL162W-AQ3E7A8 72 aa4.41□□□□□ -1.7
VPS4YPR173C YLL006W-AQ3E814 58 aa4.41□□□□□ -1.7
VPS4YPR173C YBR219CP38317 127 aa4.4□□□□□ -1.71
VPS4YPR173C VAM10Q08474 114 aa4.4□□□□□ -1.71
VPS4YPR173C YOR034C-AQ3E735 80 aa4.4□□□□□ -1.71
VPS4YPR173C TAR1Q8TGM6 124 aa4.4□□□□□ -1.71
VPS4YPR173C YHL018WP38744 120 aaPredicted RBP4.39□□□□□ -1.71
VPS4YPR173C YPS5P53057 165 aa4.39□□□□□ -1.71
VPS4YPR173C IRC21Q04772 201 aa4.39□□□□□ -1.71
VPS4YPR173C YMR122W-AQ3E842 84 aa4.38□□□□□ -1.71
VPS4YPR173C YBR126W-AQ8TGU7 68 aa4.38□□□□□ -1.71
VPS4YPR173C URA2P07259 2214 aaKnown RBP4.37□□□□□ -1.71
VPS4YPR173C HAL1Q01766 294 aa4.36□□□□□ -1.71
VPS4YPR173C ICY1Q04329 127 aa4.36□□□□□ -1.71
VPS4YPR173C YLR285C-AQ3E771 56 aa4.36□□□□□ -1.71
VPS4YPR173C GAT4P40569 121 aa4.35□□□□□ -1.71
VPS4YPR173C YGR240C-AQ3E786 66 aa4.35□□□□□ -1.71
VPS4YPR173C YAL065CO13511 128 aa4.34□□□□□ -1.71
VPS4YPR173C RPL29P05747 59 aaPredicted RBP4.34□□□□□ -1.71
VPS4YPR173C YER039C-AP0CD97 72 aa4.34□□□□□ -1.71
VPS4YPR173C YER187WP40102 141 aa4.34□□□□□ -1.71
VPS4YPR173C ERI1P62651 68 aaKnown RBP4.34□□□□□ -1.71
VPS4YPR173C ATP18P81450 59 aa4.34□□□□□ -1.71
VPS4YPR173C YDL241WQ07738 123 aa4.34□□□□□ -1.71
VPS4YPR173C Q0297Q9ZZV8 51 aa4.34□□□□□ -1.71
VPS4YPR173C YCR041WP37265 110 aa4.33□□□□□ -1.72
VPS4YPR173C MPC3P53311 146 aa4.33□□□□□ -1.72
VPS4YPR173C RSM19P53733 91 aaPredicted RBP4.33□□□□□ -1.72
VPS4YPR173C YMR175W-AQ3E766 64 aa4.33□□□□□ -1.72
VPS4YPR173C ERG28P40030 148 aa4.32□□□□□ -1.72
VPS4YPR173C IRA1P18963 3092 aa4.32□□□□□ -1.72
VPS4YPR173C GCN1P33892 2672 aaKnown RBP4.32□□□□□ -1.72
VPS4YPR173C YER145C-AA0A023PYF4 145 aa4.31□□□□□ -1.72
VPS4YPR173C YLR156WP0CE96 114 aa4.31□□□□□ -1.72
VPS4YPR173C YLR159WP0CE97 114 aa4.31□□□□□ -1.72
VPS4YPR173C YLR161WP0CE98 114 aa4.31□□□□□ -1.72
VPS4YPR173C YCR050CP25630 102 aa4.31□□□□□ -1.72
VPS4YPR173C TSC3Q3E790 80 aa4.31□□□□□ -1.72
VPS4YPR173C TOR2P32600 2474 aaKnown RBP4.3□□□□□ -1.72
VPS4YPR173C YHR212W-AP0CX91 67 aa4.3□□□□□ -1.72
VPS4YPR173C EDC1P53080 175 aaPredicted RBP4.3□□□□□ -1.72
VPS4YPR173C YLR281CQ05863 155 aa4.3□□□□□ -1.72
VPS4YPR173C CRC1Q12289 327 aa4.3□□□□□ -1.72
VPS4YPR173C YKL183C-AQ3E765 70 aa4.3□□□□□ -1.72
VPS4YPR173C YBR056W-AI2HB52 66 aa4.29□□□□□ -1.72
VPS4YPR173C RPB9P27999 122 aa4.29□□□□□ -1.72
VPS4YPR173C MVB12P42939 101 aa4.29□□□□□ -1.72
VPS4YPR173C SBH1P52870 82 aa4.29□□□□□ -1.72
VPS4YPR173C RDS3Q06835 107 aaPredicted RBP4.29□□□□□ -1.72
VPS4YPR173C YFR009W-AP0C5M9 85 aa4.28□□□□□ -1.72
VPS4YPR173C RPC10P40422 70 aa4.28□□□□□ -1.72
VPS4YPR173C SMD1Q02260 146 aaPredicted RBP4.28□□□□□ -1.72
VPS4YPR173C YDR246W-AQ3E763 66 aa4.28□□□□□ -1.72
VPS4YPR173C AIM4P38305 123 aaPredicted RBP4.27□□□□□ -1.73
VPS4YPR173C ATP20Q12233 115 aa4.27□□□□□ -1.73
VPS4YPR173C RPL26AP05743 127 aaKnown RBP4.26□□□□□ -1.73
VPS4YPR173C YCR001WP25347 104 aa4.26□□□□□ -1.73
VPS4YPR173C TDA2P40045 126 aa4.26□□□□□ -1.73
VPS4YPR173C RPL38P49167 78 aaKnown RBP4.26□□□□□ -1.73
VPS4YPR173C RPL26BP53221 127 aaKnown RBP4.26□□□□□ -1.73
VPS4YPR173C YDR274CP87283 123 aa4.26□□□□□ -1.73
VPS4YPR173C YPR010C-AA5Z2X5 72 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 133.1 ms