RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeastyeast

Gene CBC2, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBC2YPL178W HTL1Q9URQ5 78 aa3.81□□□□□ -1.8
CBC2YPL178W RPL33AP05744 107 aaKnown RBP3.8□□□□□ -1.8
CBC2YPL178W YKR041WP36134 250 aa3.8□□□□□ -1.8
CBC2YPL178W SVP26P38869 228 aa3.8□□□□□ -1.8
CBC2YPL178W YER134CP40081 178 aa3.8□□□□□ -1.8
CBC2YPL178W YNL200CP40165 246 aaKnown RBP3.8□□□□□ -1.8
CBC2YPL178W RPL33BP41056 107 aaKnown RBP3.8□□□□□ -1.8
CBC2YPL178W CWP2P43497 92 aa3.8□□□□□ -1.8
CBC2YPL178W YDR029WQ12111 104 aa3.8□□□□□ -1.8
CBC2YPL178W YOR008C-AQ3E7B9 74 aa3.8□□□□□ -1.8
CBC2YPL178W YCR085WP25650 117 aa3.79□□□□□ -1.8
CBC2YPL178W RPA12P32529 125 aaKnown RBP3.79□□□□□ -1.8
CBC2YPL178W PET8P38921 284 aa3.79□□□□□ -1.8
CBC2YPL178W MGR2Q02889 113 aa3.79□□□□□ -1.8
CBC2YPL178W ENV10Q99382 181 aa3.79□□□□□ -1.8
CBC2YPL178W TRP1P00912 224 aa3.78□□□□□ -1.8
CBC2YPL178W URM1P40554 99 aaPredicted RBP3.78□□□□□ -1.8
CBC2YPL178W TOS6P48560 102 aa3.78□□□□□ -1.8
CBC2YPL178W YLR296WQ05898 108 aa3.78□□□□□ -1.8
CBC2YPL178W YNL277W-AQ3E7Z0 62 aa3.78□□□□□ -1.8
CBC2YPL178W YCL021W-AQ96VH3 125 aa3.78□□□□□ -1.8
CBC2YPL178W YPL229WQ99395 206 aa3.78□□□□□ -1.8
CBC2YPL178W DIF1O13577 133 aa3.77□□□□□ -1.81
CBC2YPL178W RPL28P02406 149 aaKnown RBP3.77□□□□□ -1.81
CBC2YPL178W AQY1P0CD91 305 aa3.77□□□□□ -1.81
CBC2YPL178W PCL2P25693 308 aa3.77□□□□□ -1.81
CBC2YPL178W RPL16AP26784 199 aaKnown RBP3.77□□□□□ -1.81
CBC2YPL178W MID2P36027 376 aa3.77□□□□□ -1.81
CBC2YPL178W YGL088WP53151 121 aa3.77□□□□□ -1.81
CBC2YPL178W YGR164WP53291 111 aa3.77□□□□□ -1.81
CBC2YPL178W YIL014C-AQ02598 104 aa3.77□□□□□ -1.81
CBC2YPL178W YMR103CQ04436 120 aa3.77□□□□□ -1.81
CBC2YPL178W YPR195CQ06594 109 aa3.77□□□□□ -1.81
CBC2YPL178W DFM1Q12743 341 aaKnown RBP3.77□□□□□ -1.81
CBC2YPL178W YLL066W-BQ8TGJ7 56 aa3.77□□□□□ -1.81
CBC2YPL178W NHP2P32495 156 aaPredicted RBP3.76□□□□□ -1.81
CBC2YPL178W SFT1P43682 97 aa3.76□□□□□ -1.81
CBC2YPL178W YJR146WP47174 117 aa3.76□□□□□ -1.81
CBC2YPL178W YKL023C-AQ2V2P3 75 aa3.76□□□□□ -1.81
CBC2YPL178W YAR023CD6VPM8 179 aa3.75□□□□□ -1.81
CBC2YPL178W YAR029WP39549 74 aa3.75□□□□□ -1.81
CBC2YPL178W GAT4P40569 121 aa3.75□□□□□ -1.81
CBC2YPL178W YDR119W-AQ2V2P9 66 aa3.75□□□□□ -1.81
CBC2YPL178W RRT15Q3E811 62 aa3.75□□□□□ -1.81
CBC2YPL178W YFL041W-AQ3E817 63 aa3.75□□□□□ -1.81
CBC2YPL178W HMRA2P0CY13 119 aa3.74□□□□□ -1.81
CBC2YPL178W KNH1P50112 268 aa3.74□□□□□ -1.81
CBC2YPL178W YDR115WQ04598 105 aa3.74□□□□□ -1.81
CBC2YPL178W YAL063C-AQ3E791 96 aa3.74□□□□□ -1.81
CBC2YPL178W TOM6P33448 61 aa3.73□□□□□ -1.81
CBC2YPL178W PEX22P39718 180 aa3.73□□□□□ -1.81
CBC2YPL178W YEL008WP40001 126 aa3.73□□□□□ -1.81
CBC2YPL178W POP3P53833 195 aaPredicted RBP3.73□□□□□ -1.81
CBC2YPL178W YDR042CQ03205 200 aa3.73□□□□□ -1.81
CBC2YPL178W HPA2Q06592 156 aa3.73□□□□□ -1.81
CBC2YPL178W SCS22Q6Q595 175 aa3.73□□□□□ -1.81
CBC2YPL178W RPL18AP0CX49 186 aaKnown RBP3.72□□□□□ -1.81
CBC2YPL178W RPL18BP0CX50 186 aaKnown RBP3.72□□□□□ -1.81
CBC2YPL178W APS1P35181 156 aa3.72□□□□□ -1.81
CBC2YPL178W RPC10P40422 70 aa3.72□□□□□ -1.81
CBC2YPL178W YDR034C-AP0C289 58 aa3.71□□□□□ -1.82
CBC2YPL178W YCR050CP25630 102 aa3.71□□□□□ -1.82
CBC2YPL178W YHL018WP38744 120 aaPredicted RBP3.71□□□□□ -1.82
CBC2YPL178W YPL073CP40323 161 aa3.71□□□□□ -1.82
CBC2YPL178W YMR175W-AQ3E766 64 aa3.71□□□□□ -1.82
CBC2YPL178W COA3Q3E7B2 85 aa3.71□□□□□ -1.82
CBC2YPL178W KSH1Q8TGJ3 72 aa3.71□□□□□ -1.82
CBC2YPL178W YAL064WP39711 94 aa3.7□□□□□ -1.82
CBC2YPL178W GIS2P53849 153 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82 RIP-Chip
CBC2YPL178W LCL2Q08045 131 aa3.7□□□□□ -1.82
CBC2YPL178W YLR112WQ12130 139 aa3.7□□□□□ -1.82
CBC2YPL178W IGO2Q9P305 131 aa3.7□□□□□ -1.82
CBC2YPL178W YHL042WP38729 150 aa3.69□□□□□ -1.82
CBC2YPL178W SNA2P56508 79 aa3.69□□□□□ -1.82
CBC2YPL178W YMR295CQ03559 197 aa3.69□□□□□ -1.82
CBC2YPL178W ATP15P21306 62 aa3.68□□□□□ -1.82
CBC2YPL178W SMP1P38128 452 aa3.68□□□□□ -1.82
CBC2YPL178W YBR219CP38317 127 aa3.68□□□□□ -1.82
CBC2YPL178W VTC1P40046 129 aaRIP-Chip data3.68□□□□□ -1.82not detected
CBC2YPL178W PPT2Q12036 173 aa3.68□□□□□ -1.82
CBC2YPL178W YKL044WP36092 106 aa3.67□□□□□ -1.82
CBC2YPL178W SHU1P38751 150 aa3.67□□□□□ -1.82
CBC2YPL178W YLR194CQ05777 254 aa3.67□□□□□ -1.82
CBC2YPL178W YDL241WQ07738 123 aa3.67□□□□□ -1.82
CBC2YPL178W YPL038W-AQ3E7B4 63 aa3.67□□□□□ -1.82
CBC2YPL178W PEX17P40155 199 aa3.66□□□□□ -1.82
CBC2YPL178W YPL261CQ08976 102 aa3.66□□□□□ -1.82
CBC2YPL178W RPL32P38061 130 aaKnown RBP3.65□□□□□ -1.83
CBC2YPL178W YBL081WP38180 368 aaKnown RBP3.65□□□□□ -1.83
CBC2YPL178W YER181CP40097 107 aa3.65□□□□□ -1.83
CBC2YPL178W SKI6P46948 246 aaPredicted RBP3.65□□□□□ -1.83
CBC2YPL178W RSM19P53733 91 aaPredicted RBP3.65□□□□□ -1.83
CBC2YPL178W YAL065CO13511 128 aa3.64□□□□□ -1.83
CBC2YPL178W QCR8P08525 94 aa3.64□□□□□ -1.83
CBC2YPL178W UBC4P15731 148 aa3.64□□□□□ -1.83
CBC2YPL178W COX14P39103 70 aa3.64□□□□□ -1.83
CBC2YPL178W SHH4Q06236 168 aa3.64□□□□□ -1.83
CBC2YPL178W YGL041C-BQ3E750 60 aa3.64□□□□□ -1.83
CBC2YPL178W YHR139C-AO13536 103 aa3.63□□□□□ -1.83
CBC2YPL178W SMD1Q02260 146 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms