RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W CCW14O13547 238 aa2.76□□□□□ -1.97
SWI1YPL016W NCE101Q02820 53 aa2.76□□□□□ -1.97
SWI1YPL016W KTI11Q3E840 82 aa2.76□□□□□ -1.97
SWI1YPL016W RPS27AP35997 82 aaKnown RBP2.76□□□□□ -1.97
SWI1YPL016W RPS27BP38711 82 aa2.76□□□□□ -1.97
SWI1YPL016W OST1P41543 476 aaKnown RBP2.76□□□□□ -1.97
SWI1YPL016W IMP2P46972 177 aa2.76□□□□□ -1.97
SWI1YPL016W SHH4Q06236 168 aa2.76□□□□□ -1.97
SWI1YPL016W SRL1Q08673 210 aa2.76□□□□□ -1.97
SWI1YPL016W NCA3P46955 337 aa2.75□□□□□ -1.97
SWI1YPL016W YBR182C-AQ8TGU6 64 aa2.75□□□□□ -1.97
SWI1YPL016W YOL085CQ99345 113 aa2.75□□□□□ -1.97
SWI1YPL016W YSY6P38374 65 aa2.75□□□□□ -1.97
SWI1YPL016W YIL029CP40538 142 aa2.74□□□□□ -1.97
SWI1YPL016W REE1P40893 198 aa2.74□□□□□ -1.97
SWI1YPL016W YJL027CP47063 138 aaPredicted RBP2.74□□□□□ -1.97
SWI1YPL016W YIL156W-BQ2V2P4 73 aa2.74□□□□□ -1.97
SWI1YPL016W DAD4P69851 72 aa2.74□□□□□ -1.97
SWI1YPL016W YOR032W-AQ8TGS1 66 aa2.74□□□□□ -1.97
SWI1YPL016W YLR285C-AQ3E771 56 aa2.74□□□□□ -1.97
SWI1YPL016W YAL065CO13511 128 aa2.74□□□□□ -1.97
SWI1YPL016W SHU1P38751 150 aa2.73□□□□□ -1.97
SWI1YPL016W YNL234WP53857 426 aa2.73□□□□□ -1.97
SWI1YPL016W RPL32P38061 130 aaKnown RBP2.73□□□□□ -1.97
SWI1YPL016W YDL009CQ12210 107 aa2.73□□□□□ -1.97
SWI1YPL016W EMC6Q12431 108 aa2.73□□□□□ -1.97
SWI1YPL016W RPR2P40571 144 aa2.72□□□□□ -1.97
SWI1YPL016W UTH1P36135 365 aa2.72□□□□□ -1.97
SWI1YPL016W YOL014WQ08110 124 aa2.72□□□□□ -1.97
SWI1YPL016W YDR010CQ12426 110 aa2.72□□□□□ -1.97
SWI1YPL016W YBL071CP38185 102 aa2.71□□□□□ -1.98
SWI1YPL016W TRS23Q03784 219 aa2.71□□□□□ -1.98
SWI1YPL016W ATP20Q12233 115 aa2.71□□□□□ -1.98
SWI1YPL016W CRC1Q12289 327 aa2.71□□□□□ -1.98
SWI1YPL016W YOR381W-AQ3E804 55 aa2.71□□□□□ -1.98
SWI1YPL016W PAU7P39545 55 aa2.7□□□□□ -1.98
SWI1YPL016W YMR122CQ03879 124 aa2.7□□□□□ -1.98
SWI1YPL016W YML100W-AQ8TGT0 57 aa2.7□□□□□ -1.98
SWI1YPL016W RPL26AP05743 127 aaKnown RBP2.7□□□□□ -1.98
SWI1YPL016W YLR194CQ05777 254 aa2.7□□□□□ -1.98
SWI1YPL016W YAL064WP39711 94 aa2.69□□□□□ -1.98
SWI1YPL016W TOS6P48560 102 aa2.69□□□□□ -1.98
SWI1YPL016W YGL193CP53097 103 aa2.69□□□□□ -1.98
SWI1YPL016W YER188C-AP0C0V2 99 aa2.69□□□□□ -1.98
SWI1YPL016W LDB16P25587 256 aa2.69□□□□□ -1.98
SWI1YPL016W MPC2P38857 129 aa2.69□□□□□ -1.98
SWI1YPL016W ARC15P40518 154 aaRIP-Chip data2.69□□□□□ -1.98not detected
SWI1YPL016W FYV12Q08559 129 aa2.69□□□□□ -1.98
SWI1YPL016W HOT13P36078 116 aa2.68□□□□□ -1.98
SWI1YPL016W ECM19Q06011 112 aa2.68□□□□□ -1.98
SWI1YPL016W YHR022CP38763 256 aa2.68□□□□□ -1.98
SWI1YPL016W CTR2P38865 189 aa2.68□□□□□ -1.98
SWI1YPL016W COX17Q12287 69 aa2.68□□□□□ -1.98
SWI1YPL016W URA2P07259 2214 aaKnown RBP2.67□□□□□ -1.98
SWI1YPL016W RPL26BP53221 127 aaKnown RBP2.67□□□□□ -1.98
SWI1YPL016W YIR020CP40575 100 aa2.67□□□□□ -1.98
SWI1YPL016W HTL1Q9URQ5 78 aa2.67□□□□□ -1.98
SWI1YPL016W RPS23AP0CX29 145 aaKnown RBP2.67□□□□□ -1.98
SWI1YPL016W RPS23BP0CX30 145 aa2.67□□□□□ -1.98
SWI1YPL016W DCV1P43595 202 aa2.67□□□□□ -1.98
SWI1YPL016W YGL258W-AQ3E740 77 aa2.67□□□□□ -1.98
SWI1YPL016W YBR126W-AQ8TGU7 68 aa2.67□□□□□ -1.98
SWI1YPL016W RPS30AP0CX33 63 aaKnown RBP2.66□□□□□ -1.98
SWI1YPL016W RPS30BP0CX34 63 aaKnown RBP2.66□□□□□ -1.98
SWI1YPL016W YPR153WQ06537 140 aa2.66□□□□□ -1.98
SWI1YPL016W YPR013CQ12145 317 aa2.66□□□□□ -1.98
SWI1YPL016W YFR009W-AP0C5M9 85 aa2.66□□□□□ -1.98
SWI1YPL016W YGL088WP53151 121 aa2.66□□□□□ -1.98
SWI1YPL016W MRPL38P35996 138 aaPredicted RBP2.66□□□□□ -1.98
SWI1YPL016W HUR1P45820 110 aa2.65□□□□□ -1.98
SWI1YPL016W YAL064W-BO13512 126 aa2.65□□□□□ -1.99
SWI1YPL016W NUM1Q00402 2748 aa2.65□□□□□ -1.99
SWI1YPL016W PEX17P40155 199 aa2.65□□□□□ -1.99
SWI1YPL016W HSP12P22943 109 aaKnown RBP2.64□□□□□ -1.99
SWI1YPL016W YBR219CP38317 127 aa2.64□□□□□ -1.99
SWI1YPL016W YHL005CP38752 130 aa2.64□□□□□ -1.99
SWI1YPL016W RGM1Q00453 211 aa2.64□□□□□ -1.99
SWI1YPL016W SPG4Q04438 115 aa2.64□□□□□ -1.99
SWI1YPL016W IRC21Q04772 201 aa2.64□□□□□ -1.99
SWI1YPL016W YOR314WQ12506 109 aa2.64□□□□□ -1.99
SWI1YPL016W MPC3P53311 146 aa2.64□□□□□ -1.99
SWI1YPL016W HFA1P32874 2273 aa2.64□□□□□ -1.99
SWI1YPL016W RSM18P40033 138 aa2.64□□□□□ -1.99
SWI1YPL016W VAM10Q08474 114 aa2.64□□□□□ -1.99
SWI1YPL016W YLR236CA0A023PZG4 107 aa2.63□□□□□ -1.99
SWI1YPL016W IRC19Q07843 230 aa2.63□□□□□ -1.99
SWI1YPL016W ARF1P11076 181 aaKnown RBP2.62□□□□□ -1.99
SWI1YPL016W RPS11AP0CX47 156 aaKnown RBP2.62□□□□□ -1.99
SWI1YPL016W RPS11BP0CX48 156 aaKnown RBP2.62□□□□□ -1.99
SWI1YPL016W YER135CP40082 130 aa2.62□□□□□ -1.99
SWI1YPL016W URM1P40554 99 aaPredicted RBP2.62□□□□□ -1.99
SWI1YPL016W YOL029CQ08187 201 aa2.61□□□□□ -1.99
SWI1YPL016W YOR020W-AQ3E824 90 aa2.61□□□□□ -1.99
SWI1YPL016W YIL086CP40503 102 aa2.61□□□□□ -1.99
SWI1YPL016W YMR244WQ04018 355 aa2.61□□□□□ -1.99
SWI1YPL016W POR2P40478 281 aa2.61□□□□□ -1.99
SWI1YPL016W YDR524C-BQ3E6R4 66 aa2.61□□□□□ -1.99
SWI1YPL016W YMR105W-AQ8TGS8 64 aa2.61□□□□□ -1.99
SWI1YPL016W FMP27Q06179 2628 aa2.6□□□□□ -1.99
SWI1YPL016W YMR295CQ03559 197 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms