RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C YPR014CQ6B0W2 109 aa2.18□□□□□ -2.06
RPA43YOR340C SCM4P32564 187 aa2.17□□□□□ -2.06
RPA43YOR340C YKR070WP36151 352 aaKnown RBP2.17□□□□□ -2.06
RPA43YOR340C YEL008WP40001 126 aa2.17□□□□□ -2.06
RPA43YOR340C ERI1P62651 68 aaKnown RBP2.17□□□□□ -2.06
RPA43YOR340C CYT2Q00873 224 aa2.17□□□□□ -2.06
RPA43YOR340C TDA8Q6B2U8 126 aa2.17□□□□□ -2.06
RPA43YOR340C GSP1P32835 219 aaKnown RBP2.16□□□□□ -2.06
RPA43YOR340C GSP2P32836 220 aaKnown RBP2.16□□□□□ -2.06
RPA43YOR340C YAL064WP39711 94 aa2.16□□□□□ -2.06
RPA43YOR340C YER134CP40081 178 aa2.16□□□□□ -2.06
RPA43YOR340C GTT1P40582 234 aa2.16□□□□□ -2.06
RPA43YOR340C YAR023CD6VPM8 179 aa2.15□□□□□ -2.07
RPA43YOR340C TOS6P48560 102 aa2.15□□□□□ -2.07
RPA43YOR340C YNL184CP53876 108 aa2.15□□□□□ -2.07
RPA43YOR340C YLR194CQ05777 254 aa2.15□□□□□ -2.07
RPA43YOR340C COA3Q3E7B2 85 aa2.15□□□□□ -2.07
RPA43YOR340C YDR034C-AP0C289 58 aa2.14□□□□□ -2.07
RPA43YOR340C YLR156WP0CE96 114 aa2.14□□□□□ -2.07
RPA43YOR340C YLR159WP0CE97 114 aa2.14□□□□□ -2.07
RPA43YOR340C YLR161WP0CE98 114 aa2.14□□□□□ -2.07
RPA43YOR340C HMRA2P0CY13 119 aa2.14□□□□□ -2.07
RPA43YOR340C YKR041WP36134 250 aa2.14□□□□□ -2.07
RPA43YOR340C RPC10P40422 70 aa2.14□□□□□ -2.07
RPA43YOR340C ARL3Q02804 198 aa2.14□□□□□ -2.07
RPA43YOR340C YDR042CQ03205 200 aa2.14□□□□□ -2.07
RPA43YOR340C YMR295CQ03559 197 aa2.14□□□□□ -2.07
RPA43YOR340C YOR008C-AQ3E7B9 74 aa2.14□□□□□ -2.07
RPA43YOR340C YPR010C-AA5Z2X5 72 aa2.13□□□□□ -2.07
RPA43YOR340C YDL022C-AP0C5L6 82 aa2.13□□□□□ -2.07
RPA43YOR340C PKR1Q03880 122 aaKnown RBP2.13□□□□□ -2.07
RPA43YOR340C ZEO1Q08245 113 aa2.13□□□□□ -2.07
RPA43YOR340C YAL065CO13511 128 aa2.12□□□□□ -2.07
RPA43YOR340C ATP15P21306 62 aa2.12□□□□□ -2.07
RPA43YOR340C POP3P53833 195 aaPredicted RBP2.12□□□□□ -2.07
RPA43YOR340C SEN15Q04675 128 aa2.12□□□□□ -2.07
RPA43YOR340C IGO2Q9P305 131 aa2.12□□□□□ -2.07
RPA43YOR340C RPS28BP0C0X0 67 aaKnown RBP2.11□□□□□ -2.07
RPA43YOR340C FYV4P38783 130 aaPredicted RBP2.11□□□□□ -2.07
RPA43YOR340C CIN5P40917 295 aa2.11□□□□□ -2.07
RPA43YOR340C RGM1Q00453 211 aa2.11□□□□□ -2.07
RPA43YOR340C EMC6Q12431 108 aa2.11□□□□□ -2.07
RPA43YOR340C RPS28AQ3E7X9 67 aaPredicted RBP2.11□□□□□ -2.07
RPA43YOR340C YLR307C-AQ3E825 87 aa2.11□□□□□ -2.07
RPA43YOR340C YFR032C-BQ8TGU2 87 aa2.11□□□□□ -2.07
RPA43YOR340C ENV10Q99382 181 aa2.11□□□□□ -2.07
RPA43YOR340C YEL067CP39978 195 aa2.1□□□□□ -2.07
RPA43YOR340C SKI6P46948 246 aaPredicted RBP2.1□□□□□ -2.07
RPA43YOR340C ERV14P53173 138 aa2.1□□□□□ -2.07
RPA43YOR340C SNA2P56508 79 aa2.1□□□□□ -2.07
RPA43YOR340C YMR103CQ04436 120 aa2.1□□□□□ -2.07
RPA43YOR340C SHH4Q06236 168 aa2.1□□□□□ -2.07
RPA43YOR340C YDR029WQ12111 104 aa2.1□□□□□ -2.07
RPA43YOR340C PBI2P0CT04 75 aaKnown RBP2.09□□□□□ -2.07
RPA43YOR340C MRPS12P53732 153 aa2.09□□□□□ -2.07
RPA43YOR340C YMR175W-AQ3E766 64 aa2.09□□□□□ -2.07
RPA43YOR340C TSC3Q3E790 80 aa2.09□□□□□ -2.07
RPA43YOR340C SCS22Q6Q595 175 aa2.09□□□□□ -2.07
RPA43YOR340C MBF1O14467 151 aaKnown RBP2.08□□□□□ -2.08
RPA43YOR340C BET1P22804 142 aa2.08□□□□□ -2.08
RPA43YOR340C PAU16P35994 123 aa2.08□□□□□ -2.08
RPA43YOR340C SHU1P38751 150 aa2.08□□□□□ -2.08
RPA43YOR340C YAR029WP39549 74 aa2.08□□□□□ -2.08
RPA43YOR340C VTC1P40046 129 aaRIP-Chip data2.08□□□□□ -2.08not detected
RPA43YOR340C AIM11P87275 137 aa2.08□□□□□ -2.08
RPA43YOR340C CUE4Q04201 117 aaPredicted RBP2.08□□□□□ -2.08
RPA43YOR340C YIL134C-AQ45U18 67 aa2.08□□□□□ -2.08
RPA43YOR340C SSS1P35179 80 aa2.07□□□□□ -2.08
RPA43YOR340C YNR077CP53758 84 aa2.07□□□□□ -2.08
RPA43YOR340C YPL261CQ08976 102 aa2.07□□□□□ -2.08
RPA43YOR340C SEC11P15367 167 aa2.06□□□□□ -2.08
RPA43YOR340C DDR48P18899 430 aaKnown RBP2.06□□□□□ -2.08
RPA43YOR340C YNL190WP53872 204 aa2.06□□□□□ -2.08
RPA43YOR340C LCL1Q02786 101 aa2.06□□□□□ -2.08
RPA43YOR340C YDL241WQ07738 123 aa2.06□□□□□ -2.08
RPA43YOR340C YLR412C-AQ3E742 68 aa2.06□□□□□ -2.08
RPA43YOR340C ECM12O13529 151 aa2.05□□□□□ -2.08
RPA43YOR340C AQY2P0CD90 149 aa2.05□□□□□ -2.08
RPA43YOR340C MRPL11P36521 249 aaPredicted RBP2.05□□□□□ -2.08
RPA43YOR340C CWP2P43497 92 aa2.05□□□□□ -2.08
RPA43YOR340C MRPL44P19956 98 aa2.04□□□□□ -2.08
RPA43YOR340C MVB12P42939 101 aa2.04□□□□□ -2.08
RPA43YOR340C YGL230CP53074 147 aa2.04□□□□□ -2.08
RPA43YOR340C YLL006W-AQ3E814 58 aa2.04□□□□□ -2.08
RPA43YOR340C UGX2P32772 223 aa2.03□□□□□ -2.08
RPA43YOR340C AIM19P40502 157 aa2.03□□□□□ -2.08
RPA43YOR340C YFL019CP43576 117 aa2.03□□□□□ -2.08
RPA43YOR340C YDL157CQ12082 118 aa2.03□□□□□ -2.08
RPA43YOR340C YLR361C-AQ3E795 98 aa2.03□□□□□ -2.08
RPA43YOR340C QCR8P08525 94 aa2.02□□□□□ -2.09
RPA43YOR340C YBL039W-BP0C268 59 aa2.02□□□□□ -2.09
RPA43YOR340C YKL044WP36092 106 aa2.02□□□□□ -2.09
RPA43YOR340C YPL073CP40323 161 aa2.02□□□□□ -2.09
RPA43YOR340C YGL193CP53097 103 aa2.02□□□□□ -2.09
RPA43YOR340C COF1Q03048 143 aaKnown RBP2.02□□□□□ -2.09
RPA43YOR340C CNL1Q06333 122 aa2.02□□□□□ -2.09
RPA43YOR340C Q0032Q9ZZX7 96 aa2.02□□□□□ -2.09
RPA43YOR340C MSL1P40567 111 aaPredicted RBP2.01□□□□□ -2.09
RPA43YOR340C YGR039WP53225 103 aa2.01□□□□□ -2.09
RPA43YOR340C YDR010CQ12426 110 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms