RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YBR090CP38253 122 aa1.86□□□□□ -2.11
ATG3YNR007C YEL008WP40001 126 aa1.86□□□□□ -2.11
ATG3YNR007C YER085CP40058 173 aa1.86□□□□□ -2.11
ATG3YNR007C OST2P46964 130 aa1.86□□□□□ -2.11
ATG3YNR007C CMC2Q3E7A4 109 aa1.86□□□□□ -2.11
ATG3YNR007C Q0032Q9ZZX7 96 aa1.86□□□□□ -2.11
ATG3YNR007C NTF2P33331 125 aaKnown RBP1.85□□□□□ -2.11
ATG3YNR007C ATG8P38182 117 aaRIP-Chip data1.85□□□□□ -2.11not detected
ATG3YNR007C PEX17P40155 199 aa1.85□□□□□ -2.11
ATG3YNR007C VMA21P41806 77 aa1.85□□□□□ -2.11
ATG3YNR007C CWP2P43497 92 aa1.85□□□□□ -2.11
ATG3YNR007C YGL034CP53186 121 aa1.85□□□□□ -2.11
ATG3YNR007C CGR1P53188 120 aa1.85□□□□□ -2.11
ATG3YNR007C ATP14Q12349 124 aa1.85□□□□□ -2.11
ATG3YNR007C YAL065CO13511 128 aa1.84□□□□□ -2.11
ATG3YNR007C YBL039W-BP0C268 59 aa1.84□□□□□ -2.11
ATG3YNR007C SCM4P32564 187 aa1.84□□□□□ -2.11
ATG3YNR007C PAM17P36147 197 aa1.84□□□□□ -2.11
ATG3YNR007C KNH1P50112 268 aa1.84□□□□□ -2.11
ATG3YNR007C YDR042CQ03205 200 aa1.84□□□□□ -2.11
ATG3YNR007C CMC4Q3E7A9 73 aa1.84□□□□□ -2.11
ATG3YNR007C COA3Q3E7B2 85 aa1.84□□□□□ -2.11
ATG3YNR007C KTI11Q3E840 82 aa1.84□□□□□ -2.11
ATG3YNR007C YPR014CQ6B0W2 109 aa1.84□□□□□ -2.11
ATG3YNR007C SCS22Q6Q595 175 aa1.84□□□□□ -2.11
ATG3YNR007C MBF1O14467 151 aaKnown RBP1.83□□□□□ -2.12
ATG3YNR007C SHU1P38751 150 aa1.83□□□□□ -2.12
ATG3YNR007C GTT1P40582 234 aa1.83□□□□□ -2.12
ATG3YNR007C MVB12P42939 101 aa1.83□□□□□ -2.12
ATG3YNR007C YGL149WP53116 101 aa1.83□□□□□ -2.12
ATG3YNR007C HHO1P53551 258 aa1.83□□□□□ -2.12
ATG3YNR007C YMR295CQ03559 197 aa1.83□□□□□ -2.12
ATG3YNR007C YML108WQ03759 105 aa1.83□□□□□ -2.12
ATG3YNR007C CNL1Q06333 122 aa1.83□□□□□ -2.12
ATG3YNR007C YLR050CQ12155 161 aaKnown RBP1.83□□□□□ -2.12
ATG3YNR007C SEC4P07560 215 aaKnown RBP1.82□□□□□ -2.12
ATG3YNR007C YIL014C-AQ02598 104 aa1.82□□□□□ -2.12
ATG3YNR007C YML079WQ03629 201 aa1.82□□□□□ -2.12
ATG3YNR007C YPL257WQ08974 193 aa1.82□□□□□ -2.12
ATG3YNR007C YDR010CQ12426 110 aa1.82□□□□□ -2.12
ATG3YNR007C EMC6Q12431 108 aa1.82□□□□□ -2.12
ATG3YNR007C KSH1Q8TGJ3 72 aa1.82□□□□□ -2.12
ATG3YNR007C RPL29P05747 59 aaPredicted RBP1.81□□□□□ -2.12
ATG3YNR007C PAU16P35994 123 aa1.81□□□□□ -2.12
ATG3YNR007C MRPL24P36525 258 aaPredicted RBP1.81□□□□□ -2.12
ATG3YNR007C SPG1P50088 95 aa1.81□□□□□ -2.12
ATG3YNR007C YGL193CP53097 103 aa1.81□□□□□ -2.12
ATG3YNR007C RGM1Q00453 211 aa1.81□□□□□ -2.12
ATG3YNR007C CYT2Q00873 224 aa1.81□□□□□ -2.12
ATG3YNR007C ATP15P21306 62 aa1.8□□□□□ -2.12
ATG3YNR007C GSP1P32835 219 aaKnown RBP1.8□□□□□ -2.12
ATG3YNR007C YBR219CP38317 127 aa1.8□□□□□ -2.12
ATG3YNR007C YHR125WP38831 101 aa1.8□□□□□ -2.12
ATG3YNR007C YNL190WP53872 204 aa1.8□□□□□ -2.12
ATG3YNR007C YMR103CQ04436 120 aa1.8□□□□□ -2.12
ATG3YNR007C YGR121W-AQ3E816 71 aa1.8□□□□□ -2.12
ATG3YNR007C YOR020W-AQ3E824 90 aa1.8□□□□□ -2.12
ATG3YNR007C UBC4P15731 148 aa1.79□□□□□ -2.12
ATG3YNR007C DDR48P18899 430 aaKnown RBP1.79□□□□□ -2.12
ATG3YNR007C PRE1P22141 198 aaKnown RBP1.79□□□□□ -2.12
ATG3YNR007C YKL044WP36092 106 aa1.79□□□□□ -2.12
ATG3YNR007C MSA2P36157 363 aa1.79□□□□□ -2.12
ATG3YNR007C SFT1P43682 97 aa1.79□□□□□ -2.12
ATG3YNR007C POP3P53833 195 aaPredicted RBP1.79□□□□□ -2.12
ATG3YNR007C PAU17Q12370 124 aa1.79□□□□□ -2.12
ATG3YNR007C YKL023C-AQ2V2P3 75 aa1.79□□□□□ -2.12
ATG3YNR007C LSO2Q3E772 92 aaKnown RBP1.79□□□□□ -2.12
ATG3YNR007C COA6Q3E846 104 aa1.79□□□□□ -2.12
ATG3YNR007C IGO2Q9P305 131 aa1.79□□□□□ -2.12
ATG3YNR007C YLR236CA0A023PZG4 107 aa1.78□□□□□ -2.12
ATG3YNR007C ATP5P09457 212 aa1.78□□□□□ -2.12
ATG3YNR007C YLR156WP0CE96 114 aa1.78□□□□□ -2.12
ATG3YNR007C YLR159WP0CE97 114 aa1.78□□□□□ -2.12
ATG3YNR007C YLR161WP0CE98 114 aa1.78□□□□□ -2.12
ATG3YNR007C TIM11P81449 96 aaPredicted RBP1.78□□□□□ -2.12
ATG3YNR007C AIM11P87275 137 aa1.78□□□□□ -2.12
ATG3YNR007C DDR2P89113 61 aa1.78□□□□□ -2.12
ATG3YNR007C YPL261CQ08976 102 aa1.78□□□□□ -2.12
ATG3YNR007C YNL042W-BQ3E7Z2 85 aa1.78□□□□□ -2.12
ATG3YNR007C NHP2P32495 156 aaPredicted RBP1.77□□□□□ -2.13
ATG3YNR007C GSP2P32836 220 aaKnown RBP1.77□□□□□ -2.13
ATG3YNR007C MRPL11P36521 249 aaPredicted RBP1.77□□□□□ -2.13
ATG3YNR007C ARL3Q02804 198 aa1.77□□□□□ -2.13
ATG3YNR007C YKR041WP36134 250 aa1.76□□□□□ -2.13
ATG3YNR007C YHL018WP38744 120 aaPredicted RBP1.76□□□□□ -2.13
ATG3YNR007C NSE4P43124 402 aa1.76□□□□□ -2.13
ATG3YNR007C HPA2Q06592 156 aa1.76□□□□□ -2.13
ATG3YNR007C YLL006W-AQ3E814 58 aa1.76□□□□□ -2.13
ATG3YNR007C YBR121C-AP0C5L4 52 aa1.75□□□□□ -2.13
ATG3YNR007C YHR032W-AP0C5N6 59 aa1.75□□□□□ -2.13
ATG3YNR007C FYV5P25585 152 aa1.75□□□□□ -2.13
ATG3YNR007C FYV4P38783 130 aaPredicted RBP1.75□□□□□ -2.13
ATG3YNR007C YHR130CP38834 111 aa1.75□□□□□ -2.13
ATG3YNR007C YPL073CP40323 161 aa1.75□□□□□ -2.13
ATG3YNR007C ICY1Q04329 127 aa1.75□□□□□ -2.13
ATG3YNR007C COX7P10174 60 aa1.74□□□□□ -2.13
ATG3YNR007C UGX2P32772 223 aa1.74□□□□□ -2.13
ATG3YNR007C YER134CP40081 178 aa1.74□□□□□ -2.13
ATG3YNR007C CUE4Q04201 117 aaPredicted RBP1.74□□□□□ -2.13
ATG3YNR007C PAU23Q07987 124 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 139.4 ms