RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YNL184CP53876 108 aa6.38□□□□□ -1.39
RPD3YNL330C RGM1Q00453 211 aa6.38□□□□□ -1.39
RPD3YNL330C YMR122W-AQ3E842 84 aa6.38□□□□□ -1.39
RPD3YNL330C KRE1P17260 313 aa6.37□□□□□ -1.39
RPD3YNL330C MRPL24P36525 258 aaPredicted RBP6.37□□□□□ -1.39
RPD3YNL330C YDL186WP48568 277 aa6.37□□□□□ -1.39
RPD3YNL330C YGR240C-AQ3E786 66 aa6.37□□□□□ -1.39
RPD3YNL330C YAL063C-AQ3E791 96 aa6.37□□□□□ -1.39
RPD3YNL330C TOA2P32774 122 aa6.36□□□□□ -1.39
RPD3YNL330C AIM19P40502 157 aa6.36□□□□□ -1.39
RPD3YNL330C RPR2P40571 144 aa6.36□□□□□ -1.39
RPD3YNL330C ERI1P62651 68 aaKnown RBP6.36□□□□□ -1.39
RPD3YNL330C YOR020W-AQ3E824 90 aa6.36□□□□□ -1.39
RPD3YNL330C YDR274CP87283 123 aa6.35□□□□□ -1.39
RPD3YNL330C VAM10Q08474 114 aa6.35□□□□□ -1.39
RPD3YNL330C YBR219CP38317 127 aa6.34□□□□□ -1.39
RPD3YNL330C UBC11P52492 156 aa6.34□□□□□ -1.39
RPD3YNL330C ENV10Q99382 181 aa6.34□□□□□ -1.39
RPD3YNL330C MSN1P22148 382 aa6.33□□□□□ -1.4
RPD3YNL330C SVP26P38869 228 aa6.33□□□□□ -1.4
RPD3YNL330C SKI6P46948 246 aaPredicted RBP6.33□□□□□ -1.4
RPD3YNL330C YFL041W-AQ3E817 63 aa6.33□□□□□ -1.4
RPD3YNL330C YAR1P46683 200 aa6.32□□□□□ -1.4
RPD3YNL330C COX12Q01519 83 aa6.31□□□□□ -1.4
RPD3YNL330C YLL006W-AQ3E814 58 aa6.31□□□□□ -1.4
RPD3YNL330C PBI2P0CT04 75 aaKnown RBP6.3□□□□□ -1.4
RPD3YNL330C YCR001WP25347 104 aa6.3□□□□□ -1.4
RPD3YNL330C YGR035W-AQ45U48 73 aa6.3□□□□□ -1.4
RPD3YNL330C MSA2P36157 363 aa6.29□□□□□ -1.4
RPD3YNL330C ERG28P40030 148 aa6.29□□□□□ -1.4
RPD3YNL330C PBA1Q05778 276 aa6.29□□□□□ -1.4
RPD3YNL330C YDR381C-AQ3E6R5 114 aa6.29□□□□□ -1.4
RPD3YNL330C CRC1Q12289 327 aa6.28□□□□□ -1.4
RPD3YNL330C YPL229WQ99395 206 aa6.28□□□□□ -1.4
RPD3YNL330C YMR175W-AQ3E766 64 aa6.27□□□□□ -1.41
RPD3YNL330C YAL065CO13511 128 aa6.26□□□□□ -1.41
RPD3YNL330C YOR304C-AO14468 76 aa6.26□□□□□ -1.41
RPD3YNL330C YDL241WQ07738 123 aa6.26□□□□□ -1.41
RPD3YNL330C YLR236CA0A023PZG4 107 aa6.25□□□□□ -1.41
RPD3YNL330C HAL1Q01766 294 aa6.25□□□□□ -1.41
RPD3YNL330C YOR034C-AQ3E735 80 aa6.25□□□□□ -1.41
RPD3YNL330C YHR139C-AO13536 103 aa6.25□□□□□ -1.41
RPD3YNL330C KNH1P50112 268 aa6.25□□□□□ -1.41
RPD3YNL330C RDS3Q06835 107 aaPredicted RBP6.25□□□□□ -1.41
RPD3YNL330C YPR010C-AA5Z2X5 72 aa6.24□□□□□ -1.41
RPD3YNL330C SGF11Q03067 99 aa6.24□□□□□ -1.41
RPD3YNL330C IRC21Q04772 201 aa6.24□□□□□ -1.41
RPD3YNL330C RPC10P40422 70 aa6.23□□□□□ -1.41
RPD3YNL330C RPL29P05747 59 aaPredicted RBP6.22□□□□□ -1.41
RPD3YNL330C YJR107C-AP0CT86 78 aa6.22□□□□□ -1.41
RPD3YNL330C ICY1Q04329 127 aa6.22□□□□□ -1.41
RPD3YNL330C YDR119W-AQ2V2P9 66 aa6.21□□□□□ -1.42
RPD3YNL330C TOR1P35169 2470 aa6.2□□□□□ -1.42
RPD3YNL330C YCL042WP25572 119 aa6.2□□□□□ -1.42
RPD3YNL330C MVB12P42939 101 aa6.2□□□□□ -1.42
RPD3YNL330C YPL080CQ02826 108 aa6.2□□□□□ -1.42
RPD3YNL330C YMR320WQ04897 101 aa6.2□□□□□ -1.42
RPD3YNL330C EMC6Q12431 108 aa6.2□□□□□ -1.42
RPD3YNL330C STF1P01098 86 aa6.19□□□□□ -1.42
RPD3YNL330C SMP1P38128 452 aa6.19□□□□□ -1.42
RPD3YNL330C YGR039WP53225 103 aa6.19□□□□□ -1.42
RPD3YNL330C SMD1Q02260 146 aaPredicted RBP6.19□□□□□ -1.42
RPD3YNL330C RPL33AP05744 107 aaKnown RBP6.18□□□□□ -1.42
RPD3YNL330C RPL33BP41056 107 aaKnown RBP6.18□□□□□ -1.42
RPD3YNL330C COF1Q03048 143 aaKnown RBP6.18□□□□□ -1.42
RPD3YNL330C YHL042WP38729 150 aa6.17□□□□□ -1.42
RPD3YNL330C SPC1P46965 94 aa6.17□□□□□ -1.42
RPD3YNL330C SHH4Q06236 168 aa6.17□□□□□ -1.42
RPD3YNL330C RAD6P06104 172 aa6.16□□□□□ -1.42
RPD3YNL330C AQY2P0CD90 149 aa6.16□□□□□ -1.42
RPD3YNL330C MPC3P53311 146 aa6.16□□□□□ -1.42
RPD3YNL330C YFL019CP43576 117 aa6.15□□□□□ -1.43
RPD3YNL330C YLR281CQ05863 155 aa6.15□□□□□ -1.43
RPD3YNL330C YBL112CQ3E7Y4 105 aa6.15□□□□□ -1.43
RPD3YNL330C YAL064WP39711 94 aa6.14□□□□□ -1.43
RPD3YNL330C RPL26AP05743 127 aaKnown RBP6.13□□□□□ -1.43
RPD3YNL330C YBL039W-BP0C268 59 aa6.13□□□□□ -1.43
RPD3YNL330C RPL26BP53221 127 aaKnown RBP6.13□□□□□ -1.43
RPD3YNL330C ATP18P81450 59 aa6.13□□□□□ -1.43
RPD3YNL330C YIR021W-AQ3E739 70 aa6.13□□□□□ -1.43
RPD3YNL330C YBL081WP38180 368 aaKnown RBP6.12□□□□□ -1.43
RPD3YNL330C TSC3Q3E790 80 aa6.12□□□□□ -1.43
RPD3YNL330C YPL038W-AQ3E7B4 63 aa6.12□□□□□ -1.43
RPD3YNL330C CUP1-1P0CX80 61 aa6.11□□□□□ -1.43
RPD3YNL330C CUP1-2P0CX81 61 aa6.11□□□□□ -1.43
RPD3YNL330C DIF1O13577 133 aa6.1□□□□□ -1.43
RPD3YNL330C UBC4P15731 148 aa6.1□□□□□ -1.43
RPD3YNL330C YSY6P38374 65 aa6.1□□□□□ -1.43
RPD3YNL330C GAT4P40569 121 aa6.1□□□□□ -1.43
RPD3YNL330C YDR115WQ04598 105 aa6.1□□□□□ -1.43
RPD3YNL330C YKL069WP36088 180 aa6.09□□□□□ -1.43
RPD3YNL330C RSM19P53733 91 aaPredicted RBP6.09□□□□□ -1.43
RPD3YNL330C YNL162W-AQ3E7A8 72 aa6.09□□□□□ -1.43
RPD3YNL330C RTC6O14464 93 aa6.07□□□□□ -1.44
RPD3YNL330C YDR029WQ12111 104 aa6.07□□□□□ -1.44
RPD3YNL330C YLR285C-AQ3E771 56 aa6.07□□□□□ -1.44
RPD3YNL330C FYV5P25585 152 aa6.06□□□□□ -1.44
RPD3YNL330C SFT1P43682 97 aa6.06□□□□□ -1.44
RPD3YNL330C YLL066W-BQ8TGJ7 56 aa6.06□□□□□ -1.44
RPD3YNL330C MRP10O75012 95 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms