RNA–Protein interactions for RNA: YNL292W

PUS4, Transcript of Pseudouridine synthase, yeast

Gene PUS4, Length 1,212 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS4	YNL292W	SEC11	P15367	167 aa		4.32	□□□□□ -1.72
PUS4	YNL292W	YDL022C-A	P0C5L6	82 aa		4.31	□□□□□ -1.72
PUS4	YNL292W	CWP2	P43497	92 aa		4.31	□□□□□ -1.72
PUS4	YNL292W	YAL065C	O13511	128 aa		4.3	□□□□□ -1.72
PUS4	YNL292W	SHU1	P38751	150 aa		4.3	□□□□□ -1.72
PUS4	YNL292W	YGL230C	P53074	147 aa		4.3	□□□□□ -1.72
PUS4	YNL292W	YPL261C	Q08976	102 aa		4.3	□□□□□ -1.72
PUS4	YNL292W	YGL041C-B	Q3E750	60 aa		4.3	□□□□□ -1.72
PUS4	YNL292W	MRPL44	P19956	98 aa		4.29	□□□□□ -1.72
PUS4	YNL292W	RPL18A	P0CX49	186 aa	Known RBP	4.28	□□□□□ -1.72
PUS4	YNL292W	RPL18B	P0CX50	186 aa	Known RBP	4.28	□□□□□ -1.72
PUS4	YNL292W	YCR043C	P25361	127 aa		4.28	□□□□□ -1.72
PUS4	YNL292W	YKL044W	P36092	106 aa		4.28	□□□□□ -1.72
PUS4	YNL292W	YKR041W	P36134	250 aa		4.28	□□□□□ -1.72
PUS4	YNL292W	COX14	P39103	70 aa		4.28	□□□□□ -1.72
PUS4	YNL292W	MSL1	P40567	111 aa	Predicted RBP	4.28	□□□□□ -1.72
PUS4	YNL292W	FUN14	P18411	198 aa		4.27	□□□□□ -1.73
PUS4	YNL292W	PEX17	P40155	199 aa		4.27	□□□□□ -1.73
PUS4	YNL292W	YDL157C	Q12082	118 aa		4.27	□□□□□ -1.73
PUS4	YNL292W	YLR156W	P0CE96	114 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	YLR159W	P0CE97	114 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	YLR161W	P0CE98	114 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	YEL067C	P39978	195 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	YPL073C	P40323	161 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	NAT5	Q08689	176 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	PPT2	Q12036	173 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	FYV7	Q12247	151 aa		4.26	□□□□□ -1.73
PUS4	YNL292W	AQY2	P0CD90	149 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	CPR1	P14832	162 aa	Known RBP	4.25	□□□□□ -1.73
PUS4	YNL292W	TOA2	P32774	122 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	LSM8	P47093	109 aa	Known RBP	4.25	□□□□□ -1.73
PUS4	YNL292W	CGR1	P53188	120 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	MRPS12	P53732	153 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	YDL241W	Q07738	123 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	Q0032	Q9ZZX7	96 aa		4.25	□□□□□ -1.73
PUS4	YNL292W	RPL28	P02406	149 aa	Known RBP	4.24	□□□□□ -1.73
PUS4	YNL292W	QCR8	P08525	94 aa		4.24	□□□□□ -1.73
PUS4	YNL292W	RPF1	P38805	295 aa	Known RBP	4.24	□□□□□ -1.73
PUS4	YNL292W	ADH1	P00330	348 aa	Known RBP	4.23	□□□□□ -1.73
PUS4	YNL292W	YNR077C	P53758	84 aa		4.23	□□□□□ -1.73
PUS4	YNL292W	SMD1	Q02260	146 aa	Predicted RBP	4.23	□□□□□ -1.73
PUS4	YNL292W	IGO2	Q9P305	131 aa		4.23	□□□□□ -1.73
PUS4	YNL292W	ATP5	P09457	212 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	HAP3	P13434	144 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	UBC4	P15731	148 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	ARO2	P28777	376 aa	Known RBP	4.21	□□□□□ -1.74
PUS4	YNL292W	SCM4	P32564	187 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	OXA1	P39952	402 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	IGD1	P43598	195 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	YNL190W	P53872	204 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	YOR268C	Q08734	132 aa		4.21	□□□□□ -1.74
PUS4	YNL292W	UGX2	P32772	223 aa		4.2	□□□□□ -1.74
PUS4	YNL292W	YGL193C	P53097	103 aa		4.2	□□□□□ -1.74
PUS4	YNL292W	MBF1	O14467	151 aa	Known RBP	4.19	□□□□□ -1.74
PUS4	YNL292W	MVB12	P42939	101 aa		4.19	□□□□□ -1.74
PUS4	YNL292W	YFR057W	P43625	151 aa		4.19	□□□□□ -1.74
PUS4	YNL292W	CMC4	Q3E7A9	73 aa		4.19	□□□□□ -1.74
PUS4	YNL292W	YLL006W-A	Q3E814	58 aa		4.19	□□□□□ -1.74
PUS4	YNL292W	KTI11	Q3E840	82 aa		4.19	□□□□□ -1.74
PUS4	YNL292W	YFL019C	P43576	117 aa		4.18	□□□□□ -1.74
PUS4	YNL292W	ABF2	Q02486	183 aa		4.18	□□□□□ -1.74
PUS4	YNL292W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.18	□□□□□ -1.74
PUS4	YNL292W	YBL039W-B	P0C268	59 aa		4.17	□□□□□ -1.74
PUS4	YNL292W	SAE3	P89114	91 aa		4.17	□□□□□ -1.74
PUS4	YNL292W	YML079W	Q03629	201 aa		4.17	□□□□□ -1.74
PUS4	YNL292W	MID2	P36027	376 aa		4.16	□□□□□ -1.74
PUS4	YNL292W	KNH1	P50112	268 aa		4.16	□□□□□ -1.74
PUS4	YNL292W	PAU23	Q07987	124 aa		4.16	□□□□□ -1.74
PUS4	YNL292W	PAU17	Q12370	124 aa		4.16	□□□□□ -1.74
PUS4	YNL292W	RPL29	P05747	59 aa	Predicted RBP	4.15	□□□□□ -1.75
PUS4	YNL292W	EDC2	P40023	145 aa	Predicted RBP	4.14	□□□□□ -1.75
PUS4	YNL292W	ELC1	Q03071	99 aa		4.14	□□□□□ -1.75
PUS4	YNL292W	HPA2	Q06592	156 aa		4.14	□□□□□ -1.75
PUS4	YNL292W	YIA6	P40556	373 aa		4.13	□□□□□ -1.75
PUS4	YNL292W	YLR363W-A	Q3E747	85 aa		4.13	□□□□□ -1.75
PUS4	YNL292W	RGM1	Q00453	211 aa		4.12	□□□□□ -1.75
PUS4	YNL292W	YOR020W-A	Q3E824	90 aa		4.12	□□□□□ -1.75
PUS4	YNL292W	YKL023C-A	Q2V2P3	75 aa		4.11	□□□□□ -1.75
PUS4	YNL292W	GLC8	P41818	229 aa		4.09	□□□□□ -1.75
PUS4	YNL292W	HHF1	P02309	103 aa	Known RBP	4.08	□□□□□ -1.76
PUS4	YNL292W	COX10	P21592	462 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	YHR130C	P38834	111 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	YER181C	P40097	107 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	YPL080C	Q02826	108 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	IRC21	Q04772	201 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	KSH1	Q8TGJ3	72 aa		4.08	□□□□□ -1.76
PUS4	YNL292W	PAI3	P01094	68 aa		4.07	□□□□□ -1.76
PUS4	YNL292W	KRE1	P17260	313 aa		4.07	□□□□□ -1.76
PUS4	YNL292W	SPG1	P50088	95 aa		4.07	□□□□□ -1.76
PUS4	YNL292W	ICY1	Q04329	127 aa		4.07	□□□□□ -1.76
PUS4	YNL292W	RPL26A	P05743	127 aa	Known RBP	4.06	□□□□□ -1.76
PUS4	YNL292W	YJR085C	P47131	105 aa	Known RBP	4.06	□□□□□ -1.76
PUS4	YNL292W	RPL26B	P53221	127 aa	Known RBP	4.06	□□□□□ -1.76
PUS4	YNL292W	CWC27	Q02770	301 aa		4.06	□□□□□ -1.76
PUS4	YNL292W	YLR296W	Q05898	108 aa		4.06	□□□□□ -1.76
PUS4	YNL292W	YER078W-A	Q3E7A2	54 aa		4.06	□□□□□ -1.76
PUS4	YNL292W	YER039C-A	P0CD97	72 aa		4.05	□□□□□ -1.76
PUS4	YNL292W	POP7	P38291	140 aa		4.05	□□□□□ -1.76
PUS4	YNL292W	DDR2	P89113	61 aa		4.05	□□□□□ -1.76
PUS4	YNL292W	YOR034C-A	Q3E735	80 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms