RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YFR032C-BQ8TGU2 87 aa1.74□□□□□ -2.13
UBP15YMR304W YBR182C-AQ8TGU6 64 aa1.74□□□□□ -2.13
UBP15YMR304W YLR236CA0A023PZG4 107 aa1.73□□□□□ -2.13
UBP15YMR304W QCR9P22289 66 aa1.73□□□□□ -2.13
UBP15YMR304W YKR032WP36127 104 aa1.73□□□□□ -2.13
UBP15YMR304W GON7P46984 123 aa1.73□□□□□ -2.13
UBP15YMR304W SPG1P50088 95 aa1.73□□□□□ -2.13
UBP15YMR304W YOR105WQ08504 108 aa1.73□□□□□ -2.13
UBP15YMR304W TIM9O74700 87 aa1.73□□□□□ -2.13
UBP15YMR304W TIM12P32830 109 aa1.73□□□□□ -2.13
UBP15YMR304W YER135CP40082 130 aa1.73□□□□□ -2.13
UBP15YMR304W YPR108W-AQ3E7B3 70 aa1.73□□□□□ -2.13
UBP15YMR304W YER188C-AP0C0V2 99 aa1.73□□□□□ -2.13
UBP15YMR304W YNL217WP40152 326 aa1.73□□□□□ -2.13
UBP15YMR304W YNL234WP53857 426 aa1.73□□□□□ -2.13
UBP15YMR304W YML079WQ03629 201 aa1.73□□□□□ -2.13
UBP15YMR304W SPG4Q04438 115 aa1.73□□□□□ -2.13
UBP15YMR304W HPA2Q06592 156 aa1.73□□□□□ -2.13
UBP15YMR304W YOR268CQ08734 132 aa1.73□□□□□ -2.13
UBP15YMR304W RPS27AP35997 82 aaKnown RBP1.72□□□□□ -2.13
UBP15YMR304W RPS27BP38711 82 aa1.72□□□□□ -2.13
UBP15YMR304W YGR050CP53231 118 aa1.72□□□□□ -2.13
UBP15YMR304W ATP23P53722 227 aa1.72□□□□□ -2.13
UBP15YMR304W YPR013CQ12145 317 aa1.72□□□□□ -2.13
UBP15YMR304W YCR001WP25347 104 aa1.72□□□□□ -2.13
UBP15YMR304W YFL019CP43576 117 aa1.72□□□□□ -2.13
UBP15YMR304W YGL149WP53116 101 aa1.72□□□□□ -2.13
UBP15YMR304W YHR022CP38763 256 aa1.71□□□□□ -2.14
UBP15YMR304W YDR102CQ03864 110 aa1.71□□□□□ -2.14
UBP15YMR304W FYV5P25585 152 aa1.71□□□□□ -2.14
UBP15YMR304W YSY6P38374 65 aa1.71□□□□□ -2.14
UBP15YMR304W YPR064WQ12492 139 aa1.71□□□□□ -2.14
UBP15YMR304W YLR111WQ12528 110 aa1.71□□□□□ -2.14
UBP15YMR304W CRC1Q12289 327 aa1.71□□□□□ -2.14
UBP15YMR304W RPS23AP0CX29 145 aaKnown RBP1.7□□□□□ -2.14
UBP15YMR304W RPS23BP0CX30 145 aa1.7□□□□□ -2.14
UBP15YMR304W SHU1P38751 150 aa1.7□□□□□ -2.14
UBP15YMR304W MPC2P38857 129 aa1.7□□□□□ -2.14
UBP15YMR304W LST8P41318 303 aa1.7□□□□□ -2.14
UBP15YMR304W YOR376W-AQ3E805 51 aa1.7□□□□□ -2.14
UBP15YMR304W RPL36BO14455 100 aaKnown RBP1.7□□□□□ -2.14
UBP15YMR304W RPL36AP05745 100 aaPredicted RBP1.7□□□□□ -2.14
UBP15YMR304W APS1P35181 156 aa1.7□□□□□ -2.14
UBP15YMR304W RSM18P40033 138 aa1.7□□□□□ -2.14
UBP15YMR304W YDR210WQ03482 75 aa1.7□□□□□ -2.14
UBP15YMR304W YRA2P36036 203 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
UBP15YMR304W YER181CP40097 107 aa1.69□□□□□ -2.14
UBP15YMR304W EMC6Q12431 108 aa1.69□□□□□ -2.14
UBP15YMR304W MRPL38P35996 138 aaPredicted RBP1.69□□□□□ -2.14
UBP15YMR304W YNL162W-AQ3E7A8 72 aa1.69□□□□□ -2.14
UBP15YMR304W IRA1P18963 3092 aa1.69□□□□□ -2.14
UBP15YMR304W YBL008W-AQ3E821 79 aa1.69□□□□□ -2.14
UBP15YMR304W YSF3P0C074 85 aaPredicted RBP1.68□□□□□ -2.14
UBP15YMR304W MST27P53176 234 aa1.68□□□□□ -2.14
UBP15YMR304W PBA1Q05778 276 aa1.68□□□□□ -2.14
UBP15YMR304W RPS11AP0CX47 156 aaKnown RBP1.68□□□□□ -2.14
UBP15YMR304W RPS11BP0CX48 156 aaKnown RBP1.68□□□□□ -2.14
UBP15YMR304W BET1P22804 142 aa1.68□□□□□ -2.14
UBP15YMR304W RPL32P38061 130 aaKnown RBP1.68□□□□□ -2.14
UBP15YMR304W RPL26AP05743 127 aaKnown RBP1.67□□□□□ -2.14
UBP15YMR304W KEG1P43614 200 aa1.67□□□□□ -2.14
UBP15YMR304W YMR007WQ03675 126 aa1.67□□□□□ -2.14
UBP15YMR304W YPL261CQ08976 102 aa1.67□□□□□ -2.14
UBP15YMR304W YLR146W-AQ2V2P1 62 aa1.67□□□□□ -2.14
UBP15YMR304W FAS1P07149 2051 aaKnown RBP1.67□□□□□ -2.14
UBP15YMR304W EDC1P53080 175 aaPredicted RBP1.67□□□□□ -2.14
UBP15YMR304W IRC19Q07843 230 aa1.67□□□□□ -2.14
UBP15YMR304W YCR022CP25620 114 aa1.66□□□□□ -2.14
UBP15YMR304W YLR194CQ05777 254 aa1.66□□□□□ -2.14
UBP15YMR304W YBR027CP38220 110 aa1.66□□□□□ -2.14
UBP15YMR304W FIT2Q08906 153 aa1.66□□□□□ -2.14
UBP15YMR304W YDL007C-AQ2V2Q0 85 aa1.66□□□□□ -2.14
UBP15YMR304W RTC6O14464 93 aa1.65□□□□□ -2.14
UBP15YMR304W YFL051CP43552 160 aa1.65□□□□□ -2.14
UBP15YMR304W RPL23AP0CX41 137 aaKnown RBP1.65□□□□□ -2.15
UBP15YMR304W RPL23BP0CX42 137 aaKnown RBP1.65□□□□□ -2.15
UBP15YMR304W REE1P40893 198 aa1.65□□□□□ -2.15
UBP15YMR304W MRPS8Q03799 155 aa1.65□□□□□ -2.15
UBP15YMR304W YMR122CQ03879 124 aa1.65□□□□□ -2.15
UBP15YMR304W DAD1Q12248 94 aa1.65□□□□□ -2.15
UBP15YMR304W YIL163CP40448 117 aa1.65□□□□□ -2.15
UBP15YMR304W ATP20Q12233 115 aa1.64□□□□□ -2.15
UBP15YMR304W AIM4P38305 123 aaPredicted RBP1.64□□□□□ -2.15
UBP15YMR304W ARC15P40518 154 aaRIP-Chip data1.64□□□□□ -2.15not detected
UBP15YMR304W SIP18P50263 79 aa1.64□□□□□ -2.15
UBP15YMR304W NOP10Q6Q547 58 aaPredicted RBP1.64□□□□□ -2.15
UBP15YMR304W HSP12P22943 109 aaKnown RBP1.63□□□□□ -2.15
UBP15YMR304W SOM1Q05676 74 aa1.63□□□□□ -2.15
UBP15YMR304W MIM1Q08176 113 aa1.63□□□□□ -2.15
UBP15YMR304W IRA2P19158 3079 aa1.63□□□□□ -2.15
UBP15YMR304W MPC3P53311 146 aa1.63□□□□□ -2.15
UBP15YMR304W MRX7P53869 86 aa1.63□□□□□ -2.15
UBP15YMR304W URA2P07259 2214 aaKnown RBP1.63□□□□□ -2.15
UBP15YMR304W YLR156WP0CE96 114 aa1.63□□□□□ -2.15
UBP15YMR304W YLR159WP0CE97 114 aa1.63□□□□□ -2.15
UBP15YMR304W YLR161WP0CE98 114 aa1.63□□□□□ -2.15
UBP15YMR304W HSP150P32478 413 aa1.63□□□□□ -2.15
UBP15YMR304W QCR10P37299 77 aa1.63□□□□□ -2.15
UBP15YMR304W RPR2P40571 144 aa1.63□□□□□ -2.15
UBP15YMR304W YOR192C-CQ3E736 78 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms