RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W AQY2P0CD90 149 aa3.74□□□□□ -1.81
PRE3YJL001W YLR156WP0CE96 114 aa3.74□□□□□ -1.81
PRE3YJL001W YLR159WP0CE97 114 aa3.74□□□□□ -1.81
PRE3YJL001W YLR161WP0CE98 114 aa3.74□□□□□ -1.81
PRE3YJL001W GSP1P32835 219 aaKnown RBP3.74□□□□□ -1.81
PRE3YJL001W GSP2P32836 220 aaKnown RBP3.74□□□□□ -1.81
PRE3YJL001W ATP15P21306 62 aa3.73□□□□□ -1.81
PRE3YJL001W GTT1P40582 234 aa3.73□□□□□ -1.81
PRE3YJL001W YAL067W-AQ8TGK6 75 aa3.73□□□□□ -1.81
PRE3YJL001W RPF1P38805 295 aaKnown RBP3.72□□□□□ -1.81
PRE3YJL001W YDR042CQ03205 200 aa3.72□□□□□ -1.81
PRE3YJL001W YER134CP40081 178 aa3.71□□□□□ -1.82
PRE3YJL001W YGL193CP53097 103 aa3.71□□□□□ -1.82
PRE3YJL001W CMC2Q3E7A4 109 aa3.71□□□□□ -1.82
PRE3YJL001W Q0032Q9ZZX7 96 aa3.71□□□□□ -1.82
PRE3YJL001W YOR268CQ08734 132 aa3.7□□□□□ -1.82
PRE3YJL001W CMC4Q3E7A9 73 aa3.7□□□□□ -1.82
PRE3YJL001W HTL1Q9URQ5 78 aa3.7□□□□□ -1.82
PRE3YJL001W UBC4P15731 148 aa3.69□□□□□ -1.82
PRE3YJL001W PAU16P35994 123 aa3.69□□□□□ -1.82
PRE3YJL001W YFL019CP43576 117 aa3.69□□□□□ -1.82
PRE3YJL001W POP3P53833 195 aaPredicted RBP3.69□□□□□ -1.82
PRE3YJL001W ARL3Q02804 198 aa3.69□□□□□ -1.82
PRE3YJL001W YMR103CQ04436 120 aa3.69□□□□□ -1.82
PRE3YJL001W RPL27BP0C2H7 136 aaKnown RBP3.68□□□□□ -1.82
PRE3YJL001W MID2P36027 376 aa3.67□□□□□ -1.82
PRE3YJL001W FYV4P38783 130 aaPredicted RBP3.67□□□□□ -1.82
PRE3YJL001W SMD1Q02260 146 aaPredicted RBP3.67□□□□□ -1.82
PRE3YJL001W SHU1P38751 150 aa3.66□□□□□ -1.82
PRE3YJL001W MVB12P42939 101 aa3.66□□□□□ -1.82
PRE3YJL001W KNH1P50112 268 aa3.66□□□□□ -1.82
PRE3YJL001W AIM11P87275 137 aa3.66□□□□□ -1.82
PRE3YJL001W ECM19Q06011 112 aa3.66□□□□□ -1.82
PRE3YJL001W YBL039W-BP0C268 59 aa3.65□□□□□ -1.83
PRE3YJL001W YDL022C-AP0C5L6 82 aa3.65□□□□□ -1.83
PRE3YJL001W EDC2P40023 145 aaPredicted RBP3.65□□□□□ -1.83
PRE3YJL001W COX10P21592 462 aa3.64□□□□□ -1.83
PRE3YJL001W SCM4P32564 187 aa3.63□□□□□ -1.83
PRE3YJL001W ABF2Q02486 183 aa3.63□□□□□ -1.83
PRE3YJL001W YAL063C-AQ3E791 96 aa3.63□□□□□ -1.83
PRE3YJL001W PEX17P40155 199 aa3.62□□□□□ -1.83
PRE3YJL001W YPL261CQ08976 102 aa3.62□□□□□ -1.83
PRE3YJL001W KTI11Q3E840 82 aa3.62□□□□□ -1.83
PRE3YJL001W YKR041WP36134 250 aa3.61□□□□□ -1.83
PRE3YJL001W MRPS12P53732 153 aa3.61□□□□□ -1.83
PRE3YJL001W QCR8P08525 94 aa3.6□□□□□ -1.83
PRE3YJL001W CGR1P53188 120 aa3.6□□□□□ -1.83
PRE3YJL001W YKL023C-AQ2V2P3 75 aa3.6□□□□□ -1.83
PRE3YJL001W SCS22Q6Q595 175 aa3.6□□□□□ -1.83
PRE3YJL001W MBF1O14467 151 aaKnown RBP3.59□□□□□ -1.83
PRE3YJL001W RPL28P02406 149 aaKnown RBP3.59□□□□□ -1.83
PRE3YJL001W YER039C-AP0CD97 72 aa3.59□□□□□ -1.83
PRE3YJL001W SPG1P50088 95 aa3.59□□□□□ -1.83
PRE3YJL001W CUE4Q04201 117 aaPredicted RBP3.59□□□□□ -1.83
PRE3YJL001W YLR050CQ12155 161 aaKnown RBP3.59□□□□□ -1.83
PRE3YJL001W YLL006W-AQ3E814 58 aa3.59□□□□□ -1.83
PRE3YJL001W KRE1P17260 313 aa3.58□□□□□ -1.84
PRE3YJL001W YEL067CP39978 195 aa3.58□□□□□ -1.84
PRE3YJL001W KSH1Q8TGJ3 72 aa3.58□□□□□ -1.84
PRE3YJL001W SSS1P35179 80 aa3.57□□□□□ -1.84
PRE3YJL001W YNL190WP53872 204 aa3.57□□□□□ -1.84
PRE3YJL001W YML079WQ03629 201 aa3.57□□□□□ -1.84
PRE3YJL001W YML108WQ03759 105 aa3.57□□□□□ -1.84
PRE3YJL001W SEN15Q04675 128 aa3.57□□□□□ -1.84
PRE3YJL001W CNL1Q06333 122 aa3.57□□□□□ -1.84
PRE3YJL001W YGR121W-AQ3E816 71 aa3.57□□□□□ -1.84
PRE3YJL001W RPL29P05747 59 aaPredicted RBP3.56□□□□□ -1.84
PRE3YJL001W SEC11P15367 167 aa3.56□□□□□ -1.84
PRE3YJL001W MRPL11P36521 249 aaPredicted RBP3.56□□□□□ -1.84
PRE3YJL001W YIL134C-AQ45U18 67 aa3.56□□□□□ -1.84
PRE3YJL001W HAP3P13434 144 aa3.55□□□□□ -1.84
PRE3YJL001W YKL044WP36092 106 aa3.55□□□□□ -1.84
PRE3YJL001W MRPL44P19956 98 aa3.54□□□□□ -1.84
PRE3YJL001W UGX2P32772 223 aa3.54□□□□□ -1.84
PRE3YJL001W YPL073CP40323 161 aa3.54□□□□□ -1.84
PRE3YJL001W RPL37BP51402 88 aaKnown RBP3.54□□□□□ -1.84
PRE3YJL001W YNR077CP53758 84 aa3.54□□□□□ -1.84
PRE3YJL001W DDR2P89113 61 aa3.54□□□□□ -1.84
PRE3YJL001W HPA2Q06592 156 aa3.54□□□□□ -1.84
PRE3YJL001W IGO2Q9P305 131 aa3.54□□□□□ -1.84
PRE3YJL001W YBR121C-AP0C5L4 52 aa3.52□□□□□ -1.85
PRE3YJL001W MSL1P40567 111 aaPredicted RBP3.52□□□□□ -1.85
PRE3YJL001W YGL230CP53074 147 aa3.52□□□□□ -1.85
PRE3YJL001W YPL257WQ08974 193 aa3.52□□□□□ -1.85
PRE3YJL001W YKL183C-AQ3E765 70 aa3.51□□□□□ -1.85
PRE3YJL001W YNL042W-BQ3E7Z2 85 aa3.51□□□□□ -1.85
PRE3YJL001W YBL008W-AQ3E821 79 aa3.51□□□□□ -1.85
PRE3YJL001W COA6Q3E846 104 aa3.51□□□□□ -1.85
PRE3YJL001W ATP5P09457 212 aa3.5□□□□□ -1.85
PRE3YJL001W MRPL24P36525 258 aaPredicted RBP3.49□□□□□ -1.85
PRE3YJL001W YDL012CQ12489 107 aa3.49□□□□□ -1.85
PRE3YJL001W YOR020W-AQ3E824 90 aa3.49□□□□□ -1.85
PRE3YJL001W RGM1Q00453 211 aa3.48□□□□□ -1.85
PRE3YJL001W YDL157CQ12082 118 aa3.48□□□□□ -1.85
PRE3YJL001W IRC21Q04772 201 aa3.47□□□□□ -1.85
PRE3YJL001W PAU17Q12370 124 aa3.47□□□□□ -1.85
PRE3YJL001W YBR230W-AQ3E762 66 aa3.47□□□□□ -1.85
PRE3YJL001W RPL26AP05743 127 aaKnown RBP3.46□□□□□ -1.86
PRE3YJL001W YGL034CP53186 121 aa3.46□□□□□ -1.86
PRE3YJL001W RPL26BP53221 127 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms