RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C YNL146C-AQ3E7Z1 64 aa3.67□□□□□ -1.82
PAN1YIR006C YOR020W-AQ3E824 90 aa3.67□□□□□ -1.82
PAN1YIR006C TOR1P35169 2470 aa3.67□□□□□ -1.82
PAN1YIR006C RPB9P27999 122 aa3.67□□□□□ -1.82
PAN1YIR006C MPC2P38857 129 aa3.67□□□□□ -1.82
PAN1YIR006C YEL008WP40001 126 aa3.67□□□□□ -1.82
PAN1YIR006C YIR021W-AQ3E739 70 aa3.67□□□□□ -1.82
PAN1YIR006C YKL183C-AQ3E765 70 aa3.67□□□□□ -1.82
PAN1YIR006C MIC12P38341 106 aa3.67□□□□□ -1.82
PAN1YIR006C VAM10Q08474 114 aa3.67□□□□□ -1.82
PAN1YIR006C HAL1Q01766 294 aa3.66□□□□□ -1.82
PAN1YIR006C MGR2Q02889 113 aa3.66□□□□□ -1.82
PAN1YIR006C AQY2P0CD90 149 aa3.66□□□□□ -1.82
PAN1YIR006C YSY6P38374 65 aa3.65□□□□□ -1.82
PAN1YIR006C VTC1P40046 129 aaRIP-Chip data3.65□□□□□ -1.82not detected
PAN1YIR006C YPS5P53057 165 aa3.65□□□□□ -1.82
PAN1YIR006C SGF11Q03067 99 aa3.65□□□□□ -1.82
PAN1YIR006C YMR244WQ04018 355 aa3.65□□□□□ -1.83
PAN1YIR006C YMR317WQ04893 1140 aa3.65□□□□□ -1.83
PAN1YIR006C YLL006W-AQ3E814 58 aa3.64□□□□□ -1.83
PAN1YIR006C BET1P22804 142 aa3.64□□□□□ -1.83
PAN1YIR006C SPI1P40092 148 aa3.64□□□□□ -1.83
PAN1YIR006C YJR146WP47174 117 aa3.64□□□□□ -1.83
PAN1YIR006C MRPS8Q03799 155 aa3.64□□□□□ -1.83
PAN1YIR006C YNL194CP40169 301 aa3.64□□□□□ -1.83
PAN1YIR006C YJL027CP47063 138 aaPredicted RBP3.64□□□□□ -1.83
PAN1YIR006C YKR045CP36138 183 aa3.63□□□□□ -1.83
PAN1YIR006C SUT1P53032 299 aaKnown RBP3.63□□□□□ -1.83
PAN1YIR006C YGL041C-BQ3E750 60 aa3.63□□□□□ -1.83
PAN1YIR006C YHL037CP38733 133 aa3.63□□□□□ -1.83
PAN1YIR006C MOT3P54785 490 aaKnown RBP3.63□□□□□ -1.83
PAN1YIR006C YLR112WQ12130 139 aa3.62□□□□□ -1.83
PAN1YIR006C YMR295CQ03559 197 aa3.62□□□□□ -1.83
PAN1YIR006C YOR034C-AQ3E735 80 aa3.62□□□□□ -1.83
PAN1YIR006C YPL229WQ99395 206 aa3.62□□□□□ -1.83
PAN1YIR006C YBL039W-BP0C268 59 aa3.62□□□□□ -1.83
PAN1YIR006C YPR013CQ12145 317 aa3.62□□□□□ -1.83
PAN1YIR006C UBC4P15731 148 aa3.62□□□□□ -1.83
PAN1YIR006C YAL064WP39711 94 aa3.61□□□□□ -1.83
PAN1YIR006C YMR175W-AQ3E766 64 aa3.61□□□□□ -1.83
PAN1YIR006C RRT13P40042 185 aa3.6□□□□□ -1.83
PAN1YIR006C MVB12P42939 101 aa3.6□□□□□ -1.83
PAN1YIR006C YLR122CQ12312 125 aa3.6□□□□□ -1.83
PAN1YIR006C YLR236CA0A023PZG4 107 aa3.6□□□□□ -1.83
PAN1YIR006C RPR2P40571 144 aa3.6□□□□□ -1.83
PAN1YIR006C YGR025WP53216 100 aa3.6□□□□□ -1.83
PAN1YIR006C YAL063C-AQ3E791 96 aa3.6□□□□□ -1.83
PAN1YIR006C HHF1P02309 103 aaKnown RBP3.6□□□□□ -1.83
PAN1YIR006C AIM4P38305 123 aaPredicted RBP3.6□□□□□ -1.83
PAN1YIR006C RGM1Q00453 211 aa3.6□□□□□ -1.83
PAN1YIR006C YOR314WQ12506 109 aa3.6□□□□□ -1.83
PAN1YIR006C YFL019CP43576 117 aa3.59□□□□□ -1.83
PAN1YIR006C YGR240C-AQ3E786 66 aa3.59□□□□□ -1.83
PAN1YIR006C YLR361C-AQ3E795 98 aa3.59□□□□□ -1.83
PAN1YIR006C YHR212W-AP0CX91 67 aa3.59□□□□□ -1.83
PAN1YIR006C ATP20Q12233 115 aa3.59□□□□□ -1.83
PAN1YIR006C YMR122W-AQ3E842 84 aa3.59□□□□□ -1.83
PAN1YIR006C YDR034W-BQ6Q5X2 51 aa3.59□□□□□ -1.84
PAN1YIR006C YNR077CP53758 84 aa3.58□□□□□ -1.84
PAN1YIR006C YHL018WP38744 120 aaPredicted RBP3.58□□□□□ -1.84
PAN1YIR006C SFT1P43682 97 aa3.58□□□□□ -1.84
PAN1YIR006C ERG28P40030 148 aa3.58□□□□□ -1.84
PAN1YIR006C WWM1P43582 211 aaKnown RBP3.58□□□□□ -1.84
PAN1YIR006C YFR035CP43608 114 aa3.58□□□□□ -1.84
PAN1YIR006C MPC3P53311 146 aa3.58□□□□□ -1.84
PAN1YIR006C YJL127C-BQ3E828 52 aa3.58□□□□□ -1.84
PAN1YIR006C SMP1P38128 452 aa3.58□□□□□ -1.84
PAN1YIR006C ATP18P81450 59 aa3.57□□□□□ -1.84
PAN1YIR006C UBC11P52492 156 aa3.57□□□□□ -1.84
PAN1YIR006C COX12Q01519 83 aa3.57□□□□□ -1.84
PAN1YIR006C KRE9P39005 276 aa3.56□□□□□ -1.84
PAN1YIR006C YBR182C-AQ8TGU6 64 aa3.56□□□□□ -1.84
PAN1YIR006C YEL067CP39978 195 aa3.56□□□□□ -1.84
PAN1YIR006C COX14P39103 70 aa3.56□□□□□ -1.84
PAN1YIR006C YDR274CP87283 123 aa3.56□□□□□ -1.84
PAN1YIR006C YLR415CO13578 112 aa3.55□□□□□ -1.84
PAN1YIR006C RSM18P40033 138 aa3.55□□□□□ -1.84
PAN1YIR006C YCR050CP25630 102 aa3.54□□□□□ -1.84
PAN1YIR006C DDR2P89113 61 aa3.54□□□□□ -1.84
PAN1YIR006C KTI11Q3E840 82 aa3.54□□□□□ -1.84
PAN1YIR006C DIF1O13577 133 aa3.54□□□□□ -1.84
PAN1YIR006C RTC6O14464 93 aa3.54□□□□□ -1.84
PAN1YIR006C YLR156WP0CE96 114 aa3.54□□□□□ -1.84
PAN1YIR006C YLR159WP0CE97 114 aa3.54□□□□□ -1.84
PAN1YIR006C YLR161WP0CE98 114 aa3.54□□□□□ -1.84
PAN1YIR006C FYV5P25585 152 aa3.53□□□□□ -1.84
PAN1YIR006C RSM19P53733 91 aaPredicted RBP3.53□□□□□ -1.84
PAN1YIR006C ICY1Q04329 127 aa3.53□□□□□ -1.84
PAN1YIR006C TOM6P33448 61 aa3.53□□□□□ -1.84
PAN1YIR006C YER187WP40102 141 aa3.53□□□□□ -1.84
PAN1YIR006C YML122CQ03207 126 aa3.53□□□□□ -1.84
PAN1YIR006C YLR157W-DP0CE99 70 aa3.52□□□□□ -1.85
PAN1YIR006C YMR320WQ04897 101 aa3.52□□□□□ -1.85
PAN1YIR006C YER039C-AP0CD97 72 aa3.51□□□□□ -1.85
PAN1YIR006C Q0297Q9ZZV8 51 aa3.51□□□□□ -1.85
PAN1YIR006C RPL36BO14455 100 aaKnown RBP3.51□□□□□ -1.85
PAN1YIR006C RPS28BP0C0X0 67 aaKnown RBP3.51□□□□□ -1.85
PAN1YIR006C UBC5P15732 148 aa3.51□□□□□ -1.85
PAN1YIR006C RPS28AQ3E7X9 67 aaPredicted RBP3.51□□□□□ -1.85
PAN1YIR006C EDC2P40023 145 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms