RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YDR274CP87283 123 aa5.54□□□□□ -1.52
PEX28YHR150W YPL229WQ99395 206 aa5.54□□□□□ -1.52
PEX28YHR150W MSN1P22148 382 aa5.54□□□□□ -1.52
PEX28YHR150W YAL063C-AQ3E791 96 aa5.54□□□□□ -1.52
PEX28YHR150W YBR219CP38317 127 aa5.53□□□□□ -1.52
PEX28YHR150W AIM19P40502 157 aa5.53□□□□□ -1.52
PEX28YHR150W HUR1P45820 110 aa5.53□□□□□ -1.52
PEX28YHR150W RPP2AP05319 106 aaKnown RBP5.52□□□□□ -1.53
PEX28YHR150W PPT2Q12036 173 aa5.52□□□□□ -1.53
PEX28YHR150W YCR085WP25650 117 aa5.51□□□□□ -1.53
PEX28YHR150W MRPL24P36525 258 aaPredicted RBP5.51□□□□□ -1.53
PEX28YHR150W COX14P39103 70 aa5.51□□□□□ -1.53
PEX28YHR150W CWP2P43497 92 aa5.51□□□□□ -1.53
PEX28YHR150W RGM1Q00453 211 aa5.51□□□□□ -1.53
PEX28YHR150W YOR034C-AQ3E735 80 aa5.51□□□□□ -1.53
PEX28YHR150W YCR001WP25347 104 aa5.51□□□□□ -1.53
PEX28YHR150W VAM10Q08474 114 aa5.51□□□□□ -1.53
PEX28YHR150W PBI2P0CT04 75 aaKnown RBP5.5□□□□□ -1.53
PEX28YHR150W YAR1P46683 200 aa5.5□□□□□ -1.53
PEX28YHR150W SKI6P46948 246 aaPredicted RBP5.5□□□□□ -1.53
PEX28YHR150W COX12Q01519 83 aa5.5□□□□□ -1.53
PEX28YHR150W YAR029WP39549 74 aa5.49□□□□□ -1.53
PEX28YHR150W RPR2P40571 144 aa5.49□□□□□ -1.53
PEX28YHR150W PBA1Q05778 276 aa5.49□□□□□ -1.53
PEX28YHR150W TOA2P32774 122 aa5.48□□□□□ -1.53
PEX28YHR150W SVP26P38869 228 aa5.48□□□□□ -1.53
PEX28YHR150W HAL1Q01766 294 aa5.48□□□□□ -1.53
PEX28YHR150W YBR126W-AQ8TGU7 68 aa5.48□□□□□ -1.53
PEX28YHR150W UBC11P52492 156 aa5.48□□□□□ -1.53
PEX28YHR150W YLL006W-AQ3E814 58 aa5.48□□□□□ -1.53
PEX28YHR150W YFL041W-AQ3E817 63 aa5.48□□□□□ -1.53
PEX28YHR150W YMR122W-AQ3E842 84 aa5.48□□□□□ -1.53
PEX28YHR150W KRE1P17260 313 aa5.47□□□□□ -1.53
PEX28YHR150W MLF3P32047 452 aa5.47□□□□□ -1.53
PEX28YHR150W YDR381C-AQ3E6R5 114 aa5.46□□□□□ -1.54
PEX28YHR150W YOR020W-AQ3E824 90 aa5.46□□□□□ -1.54
PEX28YHR150W YGR240C-AQ3E786 66 aa5.45□□□□□ -1.54
PEX28YHR150W YHR139C-AO13536 103 aa5.45□□□□□ -1.54
PEX28YHR150W MSA2P36157 363 aa5.45□□□□□ -1.54
PEX28YHR150W ENV10Q99382 181 aa5.45□□□□□ -1.54
PEX28YHR150W YLR281CQ05863 155 aa5.43□□□□□ -1.54
PEX28YHR150W YAL065CO13511 128 aa5.43□□□□□ -1.54
PEX28YHR150W ERI1P62651 68 aaKnown RBP5.43□□□□□ -1.54
PEX28YHR150W SGF11Q03067 99 aa5.43□□□□□ -1.54
PEX28YHR150W YBL112CQ3E7Y4 105 aa5.43□□□□□ -1.54
PEX28YHR150W YOR304C-AO14468 76 aa5.42□□□□□ -1.54
PEX28YHR150W YGR039WP53225 103 aa5.42□□□□□ -1.54
PEX28YHR150W CRC1Q12289 327 aa5.42□□□□□ -1.54
PEX28YHR150W YLR236CA0A023PZG4 107 aa5.41□□□□□ -1.54
PEX28YHR150W KNH1P50112 268 aa5.41□□□□□ -1.54
PEX28YHR150W YLR122CQ12312 125 aa5.41□□□□□ -1.54
PEX28YHR150W IRC21Q04772 201 aa5.4□□□□□ -1.54
PEX28YHR150W STF1P01098 86 aa5.4□□□□□ -1.55
PEX28YHR150W YJR107C-AP0CT86 78 aa5.39□□□□□ -1.55
PEX28YHR150W YMR175W-AQ3E766 64 aa5.39□□□□□ -1.55
PEX28YHR150W RAD6P06104 172 aa5.38□□□□□ -1.55
PEX28YHR150W SMP1P38128 452 aa5.38□□□□□ -1.55
PEX28YHR150W ERG28P40030 148 aa5.38□□□□□ -1.55
PEX28YHR150W MPC3P53311 146 aa5.38□□□□□ -1.55
PEX28YHR150W SMD1Q02260 146 aaPredicted RBP5.38□□□□□ -1.55
PEX28YHR150W COF1Q03048 143 aaKnown RBP5.38□□□□□ -1.55
PEX28YHR150W YDR119W-AQ2V2P9 66 aa5.38□□□□□ -1.55
PEX28YHR150W YMR320WQ04897 101 aa5.37□□□□□ -1.55
PEX28YHR150W RDS3Q06835 107 aaPredicted RBP5.37□□□□□ -1.55
PEX28YHR150W EMC6Q12431 108 aa5.37□□□□□ -1.55
PEX28YHR150W ICY1Q04329 127 aa5.36□□□□□ -1.55
PEX28YHR150W RPC10P40422 70 aa5.35□□□□□ -1.55
PEX28YHR150W MVB12P42939 101 aa5.35□□□□□ -1.55
PEX28YHR150W YPL080CQ02826 108 aa5.35□□□□□ -1.55
PEX28YHR150W YDL241WQ07738 123 aa5.35□□□□□ -1.55
PEX28YHR150W UTP20P35194 2493 aaKnown RBP5.35□□□□□ -1.55
PEX28YHR150W YBL081WP38180 368 aaKnown RBP5.34□□□□□ -1.55
PEX28YHR150W YHL042WP38729 150 aa5.34□□□□□ -1.55
PEX28YHR150W YAL064WP39711 94 aa5.34□□□□□ -1.55
PEX28YHR150W RPL33AP05744 107 aaKnown RBP5.33□□□□□ -1.56
PEX28YHR150W RPL29P05747 59 aaPredicted RBP5.33□□□□□ -1.56
PEX28YHR150W RPL33BP41056 107 aaKnown RBP5.33□□□□□ -1.56
PEX28YHR150W DIF1O13577 133 aa5.32□□□□□ -1.56
PEX28YHR150W AQY2P0CD90 149 aa5.31□□□□□ -1.56
PEX28YHR150W EDC1P53080 175 aaPredicted RBP5.31□□□□□ -1.56
PEX28YHR150W ATP18P81450 59 aa5.31□□□□□ -1.56
PEX28YHR150W SPC1P46965 94 aa5.31□□□□□ -1.56
PEX28YHR150W YDR029WQ12111 104 aa5.31□□□□□ -1.56
PEX28YHR150W YPR010C-AA5Z2X5 72 aa5.3□□□□□ -1.56
PEX28YHR150W YRA2P36036 203 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
PEX28YHR150W YHL018WP38744 120 aaPredicted RBP5.29□□□□□ -1.56
PEX28YHR150W YFL019CP43576 117 aa5.29□□□□□ -1.56
PEX28YHR150W SHH4Q06236 168 aa5.29□□□□□ -1.56
PEX28YHR150W YLR285C-AQ3E771 56 aa5.29□□□□□ -1.56
PEX28YHR150W YBL039W-BP0C268 59 aa5.28□□□□□ -1.56
PEX28YHR150W YDR115WQ04598 105 aa5.28□□□□□ -1.56
PEX28YHR150W YNL162W-AQ3E7A8 72 aa5.28□□□□□ -1.56
PEX28YHR150W YPL038W-AQ3E7B4 63 aa5.28□□□□□ -1.56
PEX28YHR150W YSY6P38374 65 aa5.28□□□□□ -1.56
PEX28YHR150W YFR009W-AP0C5M9 85 aa5.27□□□□□ -1.57
PEX28YHR150W GAT4P40569 121 aa5.27□□□□□ -1.57
PEX28YHR150W AUA1P32450 94 aa5.26□□□□□ -1.57
PEX28YHR150W RPL38P49167 78 aaKnown RBP5.26□□□□□ -1.57
PEX28YHR150W TSC3Q3E790 80 aa5.26□□□□□ -1.57
PEX28YHR150W RRT15Q3E811 62 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms