RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W VHS2P40463 436 aa3.66□□□□□ -1.82
MSH1YHR120W YIA6P40556 373 aa3.66□□□□□ -1.82
MSH1YHR120W VAM10Q08474 114 aa3.66□□□□□ -1.82
MSH1YHR120W YNL190WP53872 204 aa3.65□□□□□ -1.82
MSH1YHR120W PMP3P87284 55 aa3.65□□□□□ -1.82
MSH1YHR120W HAL1Q01766 294 aa3.65□□□□□ -1.82
MSH1YHR120W SGF11Q03067 99 aa3.65□□□□□ -1.83
MSH1YHR120W YFL041W-AQ3E817 63 aa3.65□□□□□ -1.83
MSH1YHR120W YAL063C-AQ3E791 96 aa3.64□□□□□ -1.83
MSH1YHR120W YOR020W-AQ3E824 90 aa3.64□□□□□ -1.83
MSH1YHR120W YCR075W-AQ3E830 75 aa3.64□□□□□ -1.83
MSH1YHR120W UBC11P52492 156 aa3.63□□□□□ -1.83
MSH1YHR120W PPT2Q12036 173 aa3.63□□□□□ -1.83
MSH1YHR120W YDR381C-AQ3E6R5 114 aa3.63□□□□□ -1.83
MSH1YHR120W YBR126W-AQ8TGU7 68 aa3.63□□□□□ -1.83
MSH1YHR120W YCL021W-AQ96VH3 125 aa3.63□□□□□ -1.83
MSH1YHR120W MSA2P36157 363 aa3.63□□□□□ -1.83
MSH1YHR120W KRE9P39005 276 aa3.63□□□□□ -1.83
MSH1YHR120W COX14P39103 70 aa3.63□□□□□ -1.83
MSH1YHR120W SKI6P46948 246 aaPredicted RBP3.63□□□□□ -1.83
MSH1YHR120W RGM1Q00453 211 aa3.63□□□□□ -1.83
MSH1YHR120W TOA2P32774 122 aa3.62□□□□□ -1.83
MSH1YHR120W MID2P36027 376 aa3.62□□□□□ -1.83
MSH1YHR120W RPR2P40571 144 aa3.62□□□□□ -1.83
MSH1YHR120W YPS5P53057 165 aa3.62□□□□□ -1.83
MSH1YHR120W YBR209WP38311 105 aa3.62□□□□□ -1.83
MSH1YHR120W CWP2P43497 92 aa3.61□□□□□ -1.83
MSH1YHR120W DSE2P38844 325 aa3.61□□□□□ -1.83
MSH1YHR120W ARC15P40518 154 aaRIP-Chip data3.61□□□□□ -1.83not detected
MSH1YHR120W HUR1P45820 110 aa3.61□□□□□ -1.83
MSH1YHR120W YMR295CQ03559 197 aa3.61□□□□□ -1.83
MSH1YHR120W YGR240C-AQ3E786 66 aa3.61□□□□□ -1.83
MSH1YHR120W MRPL24P36525 258 aaPredicted RBP3.61□□□□□ -1.83
MSH1YHR120W SVP26P38869 228 aa3.61□□□□□ -1.83
MSH1YHR120W AIM19P40502 157 aa3.61□□□□□ -1.83
MSH1YHR120W YGL088WP53151 121 aa3.61□□□□□ -1.83
MSH1YHR120W YNL184CP53876 108 aa3.61□□□□□ -1.83
MSH1YHR120W YMR122W-AQ3E842 84 aa3.6□□□□□ -1.83
MSH1YHR120W YLR236CA0A023PZG4 107 aa3.6□□□□□ -1.83
MSH1YHR120W YBR219CP38317 127 aa3.6□□□□□ -1.83
MSH1YHR120W ABF2Q02486 183 aa3.6□□□□□ -1.83
MSH1YHR120W YIL059CP40520 121 aa3.59□□□□□ -1.83
MSH1YHR120W ERI1P62651 68 aaKnown RBP3.59□□□□□ -1.83
MSH1YHR120W SHH4Q06236 168 aa3.58□□□□□ -1.84
MSH1YHR120W YDL241WQ07738 123 aa3.58□□□□□ -1.84
MSH1YHR120W YLL006W-AQ3E814 58 aa3.58□□□□□ -1.84
MSH1YHR120W RPL29P05747 59 aaPredicted RBP3.57□□□□□ -1.84
MSH1YHR120W ERG28P40030 148 aa3.57□□□□□ -1.84
MSH1YHR120W YAR1P46683 200 aa3.57□□□□□ -1.84
MSH1YHR120W YHR139C-AO13536 103 aa3.57□□□□□ -1.84
MSH1YHR120W YDR119W-AQ2V2P9 66 aa3.57□□□□□ -1.84
MSH1YHR120W ENV10Q99382 181 aa3.57□□□□□ -1.84
MSH1YHR120W YAL065CO13511 128 aa3.56□□□□□ -1.84
MSH1YHR120W PBI2P0CT04 75 aaKnown RBP3.56□□□□□ -1.84
MSH1YHR120W YMR175W-AQ3E766 64 aa3.56□□□□□ -1.84
MSH1YHR120W CRC1Q12289 327 aa3.56□□□□□ -1.84
MSH1YHR120W YOR304C-AO14468 76 aa3.55□□□□□ -1.84
MSH1YHR120W YPL229WQ99395 206 aa3.55□□□□□ -1.84
MSH1YHR120W PBA1Q05778 276 aa3.55□□□□□ -1.84
MSH1YHR120W SMP1P38128 452 aa3.54□□□□□ -1.84
MSH1YHR120W ICY1Q04329 127 aa3.54□□□□□ -1.84
MSH1YHR120W GAT4P40569 121 aa3.54□□□□□ -1.84
MSH1YHR120W IRC21Q04772 201 aa3.54□□□□□ -1.84
MSH1YHR120W YIR021W-AQ3E739 70 aa3.54□□□□□ -1.84
MSH1YHR120W YPL080CQ02826 108 aa3.53□□□□□ -1.84
MSH1YHR120W YPR010C-AA5Z2X5 72 aa3.53□□□□□ -1.84
MSH1YHR120W YHL042WP38729 150 aa3.53□□□□□ -1.84
MSH1YHR120W RPC10P40422 70 aa3.53□□□□□ -1.84
MSH1YHR120W SPC1P46965 94 aa3.53□□□□□ -1.84
MSH1YHR120W KNH1P50112 268 aa3.53□□□□□ -1.85
MSH1YHR120W YPR195CQ06594 109 aa3.53□□□□□ -1.85
MSH1YHR120W YJR107C-AP0CT86 78 aa3.52□□□□□ -1.85
MSH1YHR120W RAD6P06104 172 aa3.52□□□□□ -1.85
MSH1YHR120W EMC6Q12431 108 aa3.52□□□□□ -1.85
MSH1YHR120W YPL038W-AQ3E7B4 63 aa3.52□□□□□ -1.85
MSH1YHR120W YLL066W-BQ8TGJ7 56 aa3.52□□□□□ -1.85
MSH1YHR120W ATP18P81450 59 aa3.51□□□□□ -1.85
MSH1YHR120W COF1Q03048 143 aaKnown RBP3.5□□□□□ -1.85
MSH1YHR120W YOR034C-AQ3E735 80 aa3.5□□□□□ -1.85
MSH1YHR120W RPL33AP05744 107 aaKnown RBP3.5□□□□□ -1.85
MSH1YHR120W YSY6P38374 65 aa3.5□□□□□ -1.85
MSH1YHR120W RPL33BP41056 107 aaKnown RBP3.5□□□□□ -1.85
MSH1YHR120W MVB12P42939 101 aa3.49□□□□□ -1.85
MSH1YHR120W YGR039WP53225 103 aa3.49□□□□□ -1.85
MSH1YHR120W MPC3P53311 146 aa3.49□□□□□ -1.85
MSH1YHR120W TOM6P33448 61 aa3.49□□□□□ -1.85
MSH1YHR120W RSM19P53733 91 aaPredicted RBP3.49□□□□□ -1.85
MSH1YHR120W YMR320WQ04897 101 aa3.49□□□□□ -1.85
MSH1YHR120W YFL019CP43576 117 aa3.48□□□□□ -1.85
MSH1YHR120W GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
MSH1YHR120W RTC6O14464 93 aa3.48□□□□□ -1.85
MSH1YHR120W STF1P01098 86 aa3.48□□□□□ -1.85
MSH1YHR120W MRP10O75012 95 aa3.47□□□□□ -1.85
MSH1YHR120W RPL11AP0C0W9 174 aaKnown RBP3.47□□□□□ -1.85
MSH1YHR120W YBL039W-BP0C268 59 aa3.47□□□□□ -1.85
MSH1YHR120W UBC4P15731 148 aa3.47□□□□□ -1.85
MSH1YHR120W RPL11BQ3E757 174 aaPredicted RBP3.47□□□□□ -1.85
MSH1YHR120W YNL162W-AQ3E7A8 72 aa3.47□□□□□ -1.85
MSH1YHR120W DIF1O13577 133 aa3.46□□□□□ -1.86
MSH1YHR120W YDR115WQ04598 105 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms