RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W ENV10Q99382 181 aa1.37□□□□□ -2.19
BRP1YGL007W RPS28BP0C0X0 67 aaKnown RBP1.36□□□□□ -2.19
BRP1YGL007W YPR170W-BP0C5R9 85 aa1.36□□□□□ -2.19
BRP1YGL007W GSP1P32835 219 aaKnown RBP1.36□□□□□ -2.19
BRP1YGL007W YAR029WP39549 74 aa1.36□□□□□ -2.19
BRP1YGL007W CIN5P40917 295 aa1.36□□□□□ -2.19
BRP1YGL007W HHO1P53551 258 aa1.36□□□□□ -2.19
BRP1YGL007W YNL184CP53876 108 aa1.36□□□□□ -2.19
BRP1YGL007W YDR042CQ03205 200 aa1.36□□□□□ -2.19
BRP1YGL007W PKR1Q03880 122 aaKnown RBP1.36□□□□□ -2.19
BRP1YGL007W YDL241WQ07738 123 aa1.36□□□□□ -2.19
BRP1YGL007W WIP1Q2V2P8 89 aa1.36□□□□□ -2.19
BRP1YGL007W COA3Q3E7B2 85 aa1.36□□□□□ -2.19
BRP1YGL007W RPS28AQ3E7X9 67 aaPredicted RBP1.36□□□□□ -2.19
BRP1YGL007W YPR014CQ6B0W2 109 aa1.36□□□□□ -2.19
BRP1YGL007W YLR156WP0CE96 114 aa1.35□□□□□ -2.19
BRP1YGL007W YLR159WP0CE97 114 aa1.35□□□□□ -2.19
BRP1YGL007W YLR161WP0CE98 114 aa1.35□□□□□ -2.19
BRP1YGL007W GSP2P32836 220 aaKnown RBP1.35□□□□□ -2.19
BRP1YGL007W NSE4P43124 402 aa1.35□□□□□ -2.19
BRP1YGL007W SNA2P56508 79 aa1.35□□□□□ -2.19
BRP1YGL007W CYT2Q00873 224 aa1.35□□□□□ -2.19
BRP1YGL007W YOR020W-AQ3E824 90 aa1.35□□□□□ -2.19
BRP1YGL007W YHR032W-AP0C5N6 59 aa1.34□□□□□ -2.19
BRP1YGL007W HMRA2P0CY13 119 aa1.34□□□□□ -2.19
BRP1YGL007W DDR48P18899 430 aaKnown RBP1.34□□□□□ -2.19
BRP1YGL007W ATP15P21306 62 aa1.34□□□□□ -2.19
BRP1YGL007W YHR125WP38831 101 aa1.34□□□□□ -2.19
BRP1YGL007W VTC1P40046 129 aaRIP-Chip data1.34□□□□□ -2.19not detected
BRP1YGL007W AIM19P40502 157 aa1.34□□□□□ -2.19
BRP1YGL007W OST2P46964 130 aa1.34□□□□□ -2.19
BRP1YGL007W ABF2Q02486 183 aa1.34□□□□□ -2.19
BRP1YGL007W YOR268CQ08734 132 aa1.34□□□□□ -2.19
BRP1YGL007W LSO2Q3E772 92 aaKnown RBP1.34□□□□□ -2.19
BRP1YGL007W ECM12O13529 151 aa1.33□□□□□ -2.2
BRP1YGL007W MBF1O14467 151 aaKnown RBP1.33□□□□□ -2.2
BRP1YGL007W YDL022C-AP0C5L6 82 aa1.33□□□□□ -2.2
BRP1YGL007W PAU16P35994 123 aa1.33□□□□□ -2.2
BRP1YGL007W GTT1P40582 234 aa1.33□□□□□ -2.2
BRP1YGL007W ERV14P53173 138 aa1.33□□□□□ -2.2
BRP1YGL007W YDR010CQ12426 110 aa1.33□□□□□ -2.2
BRP1YGL007W YJL197C-AP0C5P0 93 aa1.32□□□□□ -2.2
BRP1YGL007W AQY2P0CD90 149 aa1.32□□□□□ -2.2
BRP1YGL007W YER134CP40081 178 aa1.32□□□□□ -2.2
BRP1YGL007W YGL193CP53097 103 aa1.32□□□□□ -2.2
BRP1YGL007W MRPS12P53732 153 aa1.32□□□□□ -2.2
BRP1YGL007W POP3P53833 195 aaPredicted RBP1.32□□□□□ -2.2
BRP1YGL007W YML108WQ03759 105 aa1.32□□□□□ -2.2
BRP1YGL007W YMR103CQ04436 120 aa1.32□□□□□ -2.2
BRP1YGL007W YOL014WQ08110 124 aa1.32□□□□□ -2.2
BRP1YGL007W YLR050CQ12155 161 aaKnown RBP1.32□□□□□ -2.2
BRP1YGL007W YGL041C-BQ3E750 60 aa1.32□□□□□ -2.2
BRP1YGL007W SHU1P38751 150 aa1.31□□□□□ -2.2
BRP1YGL007W MVB12P42939 101 aa1.31□□□□□ -2.2
BRP1YGL007W CWP2P43497 92 aa1.31□□□□□ -2.2
BRP1YGL007W AIM11P87275 137 aa1.31□□□□□ -2.2
BRP1YGL007W ARL3Q02804 198 aa1.31□□□□□ -2.2
BRP1YGL007W ZEO1Q08245 113 aa1.31□□□□□ -2.2
BRP1YGL007W FYV12Q08559 129 aa1.31□□□□□ -2.2
BRP1YGL007W YDL085C-AQ3E7B7 68 aaKnown RBP1.31□□□□□ -2.2
BRP1YGL007W QCR8P08525 94 aa1.3□□□□□ -2.2
BRP1YGL007W YBL039W-BP0C268 59 aa1.3□□□□□ -2.2
BRP1YGL007W BET1P22804 142 aa1.3□□□□□ -2.2
BRP1YGL007W MID2P36027 376 aa1.3□□□□□ -2.2
BRP1YGL007W FYV4P38783 130 aaPredicted RBP1.3□□□□□ -2.2
BRP1YGL007W YEL067CP39978 195 aa1.3□□□□□ -2.2
BRP1YGL007W YFL019CP43576 117 aa1.3□□□□□ -2.2
BRP1YGL007W SHH4Q06236 168 aa1.3□□□□□ -2.2
BRP1YGL007W YKL023C-AQ2V2P3 75 aa1.3□□□□□ -2.2
BRP1YGL007W Q0032Q9ZZX7 96 aa1.3□□□□□ -2.2
BRP1YGL007W RPL29P05747 59 aaPredicted RBP1.29□□□□□ -2.2
BRP1YGL007W UBC4P15731 148 aa1.29□□□□□ -2.2
BRP1YGL007W KRE1P17260 313 aa1.29□□□□□ -2.2
BRP1YGL007W HYP2P23301 157 aaKnown RBP1.29□□□□□ -2.2
BRP1YGL007W SCM4P32564 187 aa1.29□□□□□ -2.2
BRP1YGL007W YPL261CQ08976 102 aa1.29□□□□□ -2.2
BRP1YGL007W YDL012CQ12489 107 aa1.29□□□□□ -2.2
BRP1YGL007W YLL006W-AQ3E814 58 aa1.29□□□□□ -2.2
BRP1YGL007W YML100W-AQ8TGT0 57 aa1.29□□□□□ -2.2
BRP1YGL007W YGL149WP53116 101 aa1.28□□□□□ -2.2
BRP1YGL007W YNR077CP53758 84 aa1.28□□□□□ -2.2
BRP1YGL007W YNL190WP53872 204 aa1.28□□□□□ -2.2
BRP1YGL007W CUE4Q04201 117 aaPredicted RBP1.28□□□□□ -2.2
BRP1YGL007W HPA2Q06592 156 aa1.28□□□□□ -2.2
BRP1YGL007W SCS22Q6Q595 175 aa1.28□□□□□ -2.2
BRP1YGL007W YER039C-AP0CD97 72 aa1.27□□□□□ -2.21
BRP1YGL007W SEC11P15367 167 aa1.27□□□□□ -2.21
BRP1YGL007W UGX2P32772 223 aa1.27□□□□□ -2.21
BRP1YGL007W YKL044WP36092 106 aa1.27□□□□□ -2.21
BRP1YGL007W MRPL11P36521 249 aaPredicted RBP1.27□□□□□ -2.21
BRP1YGL007W KNH1P50112 268 aa1.27□□□□□ -2.21
BRP1YGL007W YML079WQ03629 201 aa1.27□□□□□ -2.21
BRP1YGL007W CNL1Q06333 122 aa1.27□□□□□ -2.21
BRP1YGL007W YGR121W-AQ3E816 71 aa1.27□□□□□ -2.21
BRP1YGL007W HAP3P13434 144 aa1.26□□□□□ -2.21
BRP1YGL007W MRPL44P19956 98 aa1.26□□□□□ -2.21
BRP1YGL007W YPL073CP40323 161 aa1.26□□□□□ -2.21
BRP1YGL007W SKI6P46948 246 aaPredicted RBP1.26□□□□□ -2.21
BRP1YGL007W SPG1P50088 95 aa1.26□□□□□ -2.21
BRP1YGL007W YGL230CP53074 147 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms