RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W MPC2P38857 129 aa4.39□□□□□ -1.71
RPN11YFR004W UBC5P15732 148 aa4.38□□□□□ -1.71
RPN11YFR004W KRE9P39005 276 aa4.38□□□□□ -1.71
RPN11YFR004W YDR274CP87283 123 aa4.38□□□□□ -1.71
RPN11YFR004W HPA2Q06592 156 aa4.38□□□□□ -1.71
RPN11YFR004W YCR001WP25347 104 aa4.37□□□□□ -1.71
RPN11YFR004W ATX1P38636 73 aa4.37□□□□□ -1.71
RPN11YFR004W OST2P46964 130 aa4.37□□□□□ -1.71
RPN11YFR004W INO4P13902 151 aa4.36□□□□□ -1.71
RPN11YFR004W ARC15P40518 154 aaRIP-Chip data4.36□□□□□ -1.71not detected
RPN11YFR004W YMR295CQ03559 197 aa4.36□□□□□ -1.71
RPN11YFR004W YBR219CP38317 127 aa4.35□□□□□ -1.71
RPN11YFR004W DSE2P38844 325 aa4.35□□□□□ -1.71
RPN11YFR004W ABF2Q02486 183 aa4.35□□□□□ -1.71
RPN11YFR004W CRC1Q12289 327 aa4.35□□□□□ -1.71
RPN11YFR004W QCR8P08525 94 aa4.34□□□□□ -1.71
RPN11YFR004W RPA12P32529 125 aaKnown RBP4.34□□□□□ -1.71
RPN11YFR004W YIA6P40556 373 aa4.34□□□□□ -1.71
RPN11YFR004W YCR075W-AQ3E830 75 aa4.34□□□□□ -1.71
RPN11YFR004W NRG2P38082 220 aa4.33□□□□□ -1.72
RPN11YFR004W YHR130CP38834 111 aa4.33□□□□□ -1.72
RPN11YFR004W COX12Q01519 83 aa4.32□□□□□ -1.72
RPN11YFR004W VAM10Q08474 114 aa4.32□□□□□ -1.72
RPN11YFR004W COX10P21592 462 aa4.31□□□□□ -1.72
RPN11YFR004W PPT2Q12036 173 aa4.31□□□□□ -1.72
RPN11YFR004W COX14P39103 70 aa4.3□□□□□ -1.72
RPN11YFR004W YAR029WP39549 74 aa4.3□□□□□ -1.72
RPN11YFR004W CWP2P43497 92 aa4.3□□□□□ -1.72
RPN11YFR004W HAL1Q01766 294 aa4.3□□□□□ -1.72
RPN11YFR004W YOR034C-AQ3E735 80 aa4.3□□□□□ -1.72
RPN11YFR004W YGR240C-AQ3E786 66 aa4.3□□□□□ -1.72
RPN11YFR004W YLL006W-AQ3E814 58 aa4.3□□□□□ -1.72
RPN11YFR004W YMR122W-AQ3E842 84 aa4.3□□□□□ -1.72
RPN11YFR004W ISD11Q6Q560 94 aa4.3□□□□□ -1.72
RPN11YFR004W HUR1P45820 110 aa4.29□□□□□ -1.72
RPN11YFR004W GIS2P53849 153 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72 RIP-Chip
RPN11YFR004W AIM19P40502 157 aa4.28□□□□□ -1.72
RPN11YFR004W RPR2P40571 144 aa4.28□□□□□ -1.72
RPN11YFR004W YFL065CP43539 102 aa4.28□□□□□ -1.72
RPN11YFR004W RDS3Q06835 107 aaPredicted RBP4.28□□□□□ -1.72
RPN11YFR004W YPR203WQ08994 102 aa4.28□□□□□ -1.72
RPN11YFR004W ERI1P62651 68 aaKnown RBP4.27□□□□□ -1.73
RPN11YFR004W RGM1Q00453 211 aa4.27□□□□□ -1.73
RPN11YFR004W ENV10Q99382 181 aa4.27□□□□□ -1.73
RPN11YFR004W YPL229WQ99395 206 aa4.27□□□□□ -1.73
RPN11YFR004W MRPL24P36525 258 aaPredicted RBP4.26□□□□□ -1.73
RPN11YFR004W YAL065CO13511 128 aa4.25□□□□□ -1.73
RPN11YFR004W SVP26P38869 228 aa4.25□□□□□ -1.73
RPN11YFR004W SGF11Q03067 99 aa4.25□□□□□ -1.73
RPN11YFR004W PBA1Q05778 276 aa4.24□□□□□ -1.73
RPN11YFR004W YOR020W-AQ3E824 90 aa4.24□□□□□ -1.73
RPN11YFR004W PBI2P0CT04 75 aaKnown RBP4.23□□□□□ -1.73
RPN11YFR004W YAL064WP39711 94 aa4.23□□□□□ -1.73
RPN11YFR004W YAR1P46683 200 aa4.23□□□□□ -1.73
RPN11YFR004W YPL080CQ02826 108 aa4.23□□□□□ -1.73
RPN11YFR004W YMR320WQ04897 101 aa4.23□□□□□ -1.73
RPN11YFR004W YAL063C-AQ3E791 96 aa4.23□□□□□ -1.73
RPN11YFR004W YCR085WP25650 117 aa4.22□□□□□ -1.73
RPN11YFR004W YBL081WP38180 368 aaKnown RBP4.22□□□□□ -1.73
RPN11YFR004W ERG28P40030 148 aa4.22□□□□□ -1.73
RPN11YFR004W SKI6P46948 246 aaPredicted RBP4.22□□□□□ -1.73
RPN11YFR004W KNH1P50112 268 aa4.22□□□□□ -1.73
RPN11YFR004W YNL184CP53876 108 aa4.22□□□□□ -1.73
RPN11YFR004W IRC21Q04772 201 aa4.22□□□□□ -1.73
RPN11YFR004W YMR175W-AQ3E766 64 aa4.22□□□□□ -1.73
RPN11YFR004W MSA2P36157 363 aa4.21□□□□□ -1.74
RPN11YFR004W SMD1Q02260 146 aaPredicted RBP4.21□□□□□ -1.74
RPN11YFR004W YOR304C-AO14468 76 aa4.2□□□□□ -1.74
RPN11YFR004W RPL33AP05744 107 aaKnown RBP4.2□□□□□ -1.74
RPN11YFR004W RPC10P40422 70 aa4.2□□□□□ -1.74
RPN11YFR004W RPL33BP41056 107 aaKnown RBP4.2□□□□□ -1.74
RPN11YFR004W MPC3P53311 146 aa4.2□□□□□ -1.74
RPN11YFR004W YDR381C-AQ3E6R5 114 aa4.2□□□□□ -1.74
RPN11YFR004W YLR236CA0A023PZG4 107 aa4.19□□□□□ -1.74
RPN11YFR004W KRE1P17260 313 aa4.19□□□□□ -1.74
RPN11YFR004W MVB12P42939 101 aa4.19□□□□□ -1.74
RPN11YFR004W YFL041W-AQ3E817 63 aa4.19□□□□□ -1.74
RPN11YFR004W YHR139C-AO13536 103 aa4.18□□□□□ -1.74
RPN11YFR004W RRT15Q3E811 62 aa4.18□□□□□ -1.74
RPN11YFR004W YPR010C-AA5Z2X5 72 aa4.17□□□□□ -1.74
RPN11YFR004W AQY2P0CD90 149 aa4.17□□□□□ -1.74
RPN11YFR004W YJR107C-AP0CT86 78 aa4.17□□□□□ -1.74
RPN11YFR004W GAT4P40569 121 aa4.17□□□□□ -1.74
RPN11YFR004W ICY1Q04329 127 aa4.17□□□□□ -1.74
RPN11YFR004W YDL241WQ07738 123 aa4.17□□□□□ -1.74
RPN11YFR004W RPL29P05747 59 aaPredicted RBP4.16□□□□□ -1.74
RPN11YFR004W YFL019CP43576 117 aa4.16□□□□□ -1.74
RPN11YFR004W SPC1P46965 94 aa4.16□□□□□ -1.74
RPN11YFR004W YDR115WQ04598 105 aa4.16□□□□□ -1.74
RPN11YFR004W RAD6P06104 172 aa4.15□□□□□ -1.75
RPN11YFR004W YBL039W-BP0C268 59 aa4.15□□□□□ -1.75
RPN11YFR004W YBL112CQ3E7Y4 105 aa4.15□□□□□ -1.75
RPN11YFR004W YLL066W-BQ8TGJ7 56 aa4.15□□□□□ -1.75
RPN11YFR004W YCR043CP25361 127 aa4.14□□□□□ -1.75
RPN11YFR004W EDC1P53080 175 aaPredicted RBP4.14□□□□□ -1.75
RPN11YFR004W YGR039WP53225 103 aa4.14□□□□□ -1.75
RPN11YFR004W ATP18P81450 59 aa4.14□□□□□ -1.75
RPN11YFR004W YIR021W-AQ3E739 70 aa4.14□□□□□ -1.75
RPN11YFR004W IGD1P43598 195 aa4.13□□□□□ -1.75
RPN11YFR004W YNL162W-AQ3E7A8 72 aa4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms