RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YBR090CP38253 122 aa3.32□□□□□ -1.88
LCP5YER127W YAR029WP39549 74 aa3.32□□□□□ -1.88
LCP5YER127W YER076CP40049 302 aa3.32□□□□□ -1.88
LCP5YER127W CIN5P40917 295 aa3.32□□□□□ -1.88
LCP5YER127W YLR162WQ06235 118 aa3.32□□□□□ -1.88
LCP5YER127W YLR307C-AQ3E825 87 aa3.32□□□□□ -1.88
LCP5YER127W SRB6P32570 121 aa3.31□□□□□ -1.88
LCP5YER127W SRP14P38985 146 aa3.31□□□□□ -1.88
LCP5YER127W KNH1P50112 268 aa3.31□□□□□ -1.88
LCP5YER127W YGL041C-BQ3E750 60 aa3.31□□□□□ -1.88
LCP5YER127W POR1P04840 283 aaKnown RBP3.3□□□□□ -1.88
LCP5YER127W POP3P53833 195 aaPredicted RBP3.3□□□□□ -1.88
LCP5YER127W YMR175W-AQ3E766 64 aa3.3□□□□□ -1.88
LCP5YER127W YGL010WP25338 174 aa3.29□□□□□ -1.88
LCP5YER127W CUE4Q04201 117 aaPredicted RBP3.29□□□□□ -1.88
LCP5YER127W YOL014WQ08110 124 aa3.29□□□□□ -1.88
LCP5YER127W YLR118CQ12354 227 aa3.29□□□□□ -1.88
LCP5YER127W NHP6AP11632 93 aaKnown RBP3.28□□□□□ -1.88
LCP5YER127W SKI6P46948 246 aaPredicted RBP3.28□□□□□ -1.88
LCP5YER127W YNR034W-AQ3E841 98 aa3.28□□□□□ -1.88
LCP5YER127W YAL064WP39711 94 aa3.27□□□□□ -1.89
LCP5YER127W AIM19P40502 157 aa3.27□□□□□ -1.89
LCP5YER127W MPC3P53311 146 aa3.27□□□□□ -1.89
LCP5YER127W PKR1Q03880 122 aaKnown RBP3.27□□□□□ -1.89
LCP5YER127W YLR194CQ05777 254 aa3.27□□□□□ -1.89
LCP5YER127W WIP1Q2V2P8 89 aa3.27□□□□□ -1.89
LCP5YER127W YOR008C-AQ3E7B9 74 aa3.27□□□□□ -1.89
LCP5YER127W PFY1P07274 126 aa3.26□□□□□ -1.89
LCP5YER127W YDL241WQ07738 123 aa3.26□□□□□ -1.89
LCP5YER127W VMA9Q3E7B6 73 aa3.26□□□□□ -1.89
LCP5YER127W YML100W-AQ8TGT0 57 aa3.26□□□□□ -1.89
LCP5YER127W ECM12O13529 151 aa3.25□□□□□ -1.89
LCP5YER127W QCR8P08525 94 aa3.24□□□□□ -1.89
LCP5YER127W HYP2P23301 157 aaKnown RBP3.24□□□□□ -1.89
LCP5YER127W YER134CP40081 178 aa3.24□□□□□ -1.89
LCP5YER127W ERV14P53173 138 aa3.24□□□□□ -1.89
LCP5YER127W YDL085C-AQ3E7B7 68 aaKnown RBP3.24□□□□□ -1.89
LCP5YER127W RPS22BQ3E7Y3 130 aaKnown RBP3.24□□□□□ -1.89
LCP5YER127W SEC11P15367 167 aa3.23□□□□□ -1.89
LCP5YER127W PAM17P36147 197 aa3.23□□□□□ -1.89
LCP5YER127W YFL019CP43576 117 aa3.23□□□□□ -1.89
LCP5YER127W TOS6P48560 102 aa3.23□□□□□ -1.89
LCP5YER127W YDR010CQ12426 110 aa3.23□□□□□ -1.89
LCP5YER127W YEL008WP40001 126 aa3.22□□□□□ -1.89
LCP5YER127W MGR2Q02889 113 aa3.22□□□□□ -1.89
LCP5YER127W YMR295CQ03559 197 aa3.22□□□□□ -1.89
LCP5YER127W DDR48P18899 430 aaKnown RBP3.21□□□□□ -1.9
LCP5YER127W PAU15P40585 124 aa3.21□□□□□ -1.9
LCP5YER127W ATP14Q12349 124 aa3.21□□□□□ -1.9
LCP5YER127W AQY2P0CD90 149 aa3.2□□□□□ -1.9
LCP5YER127W CWP2P43497 92 aa3.2□□□□□ -1.9
LCP5YER127W YPR014CQ6B0W2 109 aa3.2□□□□□ -1.9
LCP5YER127W Q0032Q9ZZX7 96 aa3.2□□□□□ -1.9
LCP5YER127W YAL065CO13511 128 aa3.19□□□□□ -1.9
LCP5YER127W YGL149WP53116 101 aa3.19□□□□□ -1.9
LCP5YER127W PAU19P0CE85 124 aa3.18□□□□□ -1.9
LCP5YER127W PAU21P0CE86 164 aa3.18□□□□□ -1.9
LCP5YER127W PAU22P0CE87 164 aa3.18□□□□□ -1.9
LCP5YER127W PAU3P25610 124 aa3.18□□□□□ -1.9
LCP5YER127W YPL073CP40323 161 aa3.18□□□□□ -1.9
LCP5YER127W CMC2Q3E7A4 109 aa3.18□□□□□ -1.9
LCP5YER127W VMA21P41806 77 aa3.17□□□□□ -1.9
LCP5YER127W ZEO1Q08245 113 aa3.17□□□□□ -1.9
LCP5YER127W KTI11Q3E840 82 aa3.17□□□□□ -1.9
LCP5YER127W HMRA2P0CY13 119 aa3.16□□□□□ -1.9
LCP5YER127W ATG8P38182 117 aaRIP-Chip data3.16□□□□□ -1.9not detected
LCP5YER127W YIL014C-AQ02598 104 aa3.16□□□□□ -1.9
LCP5YER127W CMC4Q3E7A9 73 aa3.16□□□□□ -1.9
LCP5YER127W YBL039W-BP0C268 59 aa3.15□□□□□ -1.91
LCP5YER127W YER039C-AP0CD97 72 aa3.15□□□□□ -1.91
LCP5YER127W YDR042CQ03205 200 aa3.15□□□□□ -1.91
LCP5YER127W YHR007C-AQ07074 71 aa3.15□□□□□ -1.91
LCP5YER127W HAP3P13434 144 aa3.14□□□□□ -1.91
LCP5YER127W PRE1P22141 198 aaKnown RBP3.14□□□□□ -1.91
LCP5YER127W MVB12P42939 101 aa3.14□□□□□ -1.91
LCP5YER127W PAU16P35994 123 aa3.13□□□□□ -1.91
LCP5YER127W SHU1P38751 150 aa3.13□□□□□ -1.91
LCP5YER127W YGL193CP53097 103 aa3.13□□□□□ -1.91
LCP5YER127W YKR041WP36134 250 aa3.12□□□□□ -1.91
LCP5YER127W SHH4Q06236 168 aa3.12□□□□□ -1.91
LCP5YER127W COA3Q3E7B2 85 aa3.12□□□□□ -1.91
LCP5YER127W UBC4P15731 148 aa3.11□□□□□ -1.91
LCP5YER127W GSP1P32835 219 aaKnown RBP3.1□□□□□ -1.91
LCP5YER127W YML079WQ03629 201 aa3.1□□□□□ -1.91
LCP5YER127W KSH1Q8TGJ3 72 aa3.1□□□□□ -1.91
LCP5YER127W SPG1P50088 95 aa3.09□□□□□ -1.91
LCP5YER127W YMR103CQ04436 120 aa3.08□□□□□ -1.92
LCP5YER127W RPL29P05747 59 aaPredicted RBP3.07□□□□□ -1.92
LCP5YER127W MRPL24P36525 258 aaPredicted RBP3.07□□□□□ -1.92
LCP5YER127W HHO1P53551 258 aa3.07□□□□□ -1.92
LCP5YER127W AIM11P87275 137 aa3.07□□□□□ -1.92
LCP5YER127W YGR121W-AQ3E816 71 aa3.07□□□□□ -1.92
LCP5YER127W GTT1P40582 234 aa3.06□□□□□ -1.92
LCP5YER127W SBH1P52870 82 aa3.06□□□□□ -1.92
LCP5YER127W FYV12Q08559 129 aa3.06□□□□□ -1.92
LCP5YER127W YKL023C-AQ2V2P3 75 aa3.06□□□□□ -1.92
LCP5YER127W GSP2P32836 220 aaKnown RBP3.05□□□□□ -1.92
LCP5YER127W YNL190WP53872 204 aa3.05□□□□□ -1.92
LCP5YER127W DDR2P89113 61 aa3.05□□□□□ -1.92
LCP5YER127W YPL261CQ08976 102 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms