RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C RPB9P27999 122 aa2.54□□□□□ -2
TRS120YDR407C RPC10P40422 70 aa2.54□□□□□ -2
TRS120YDR407C SIM1P40472 476 aa2.54□□□□□ -2
TRS120YDR407C YDL186WP48568 277 aa2.54□□□□□ -2
TRS120YDR407C ICY1Q04329 127 aa2.54□□□□□ -2
TRS120YDR407C YDR115WQ04598 105 aa2.54□□□□□ -2
TRS120YDR407C HPA2Q06592 156 aa2.54□□□□□ -2
TRS120YDR407C YNL162W-AQ3E7A8 72 aa2.54□□□□□ -2
TRS120YDR407C YFL065CP43539 102 aa2.53□□□□□ -2
TRS120YDR407C YPR203WQ08994 102 aa2.53□□□□□ -2
TRS120YDR407C YOR011W-AQ3E807 68 aa2.53□□□□□ -2
TRS120YDR407C YBR126W-AQ8TGU7 68 aa2.53□□□□□ -2
TRS120YDR407C MRPL24P36525 258 aaPredicted RBP2.53□□□□□ -2
TRS120YDR407C ATX1P38636 73 aa2.53□□□□□ -2
TRS120YDR407C KEG1P43614 200 aa2.53□□□□□ -2
TRS120YDR407C YPL080CQ02826 108 aa2.53□□□□□ -2
TRS120YDR407C YIR021W-AQ3E739 70 aa2.53□□□□□ -2
TRS120YDR407C YPL038W-AQ3E7B4 63 aa2.53□□□□□ -2
TRS120YDR407C YPL229WQ99395 206 aa2.52□□□□□ -2.01
TRS120YDR407C YHR212W-AP0CX91 67 aa2.52□□□□□ -2.01
TRS120YDR407C AUA1P32450 94 aa2.52□□□□□ -2.01
TRS120YDR407C YLL006W-AQ3E814 58 aa2.52□□□□□ -2.01
TRS120YDR407C SMP1P38128 452 aa2.52□□□□□ -2.01
TRS120YDR407C BPH1P25356 2167 aa2.52□□□□□ -2.01
TRS120YDR407C YHR130CP38834 111 aa2.51□□□□□ -2.01
TRS120YDR407C ALG13P53178 202 aa2.51□□□□□ -2.01
TRS120YDR407C YPL257WQ08974 193 aa2.51□□□□□ -2.01
TRS120YDR407C YMR175W-AQ3E766 64 aa2.51□□□□□ -2.01
TRS120YDR407C IRC21Q04772 201 aa2.51□□□□□ -2.01
TRS120YDR407C UBC4P15731 148 aa2.51□□□□□ -2.01
TRS120YDR407C ERI1P62651 68 aaKnown RBP2.5□□□□□ -2.01
TRS120YDR407C YNL184CP53876 108 aa2.5□□□□□ -2.01
TRS120YDR407C SRL1Q08673 210 aa2.5□□□□□ -2.01
TRS120YDR407C PMP3P87284 55 aa2.5□□□□□ -2.01
TRS120YDR407C YFR009W-AP0C5M9 85 aa2.49□□□□□ -2.01
TRS120YDR407C YJL197C-AP0C5P0 93 aa2.49□□□□□ -2.01
TRS120YDR407C RPL18AP0CX49 186 aaKnown RBP2.49□□□□□ -2.01
TRS120YDR407C RPL18BP0CX50 186 aaKnown RBP2.49□□□□□ -2.01
TRS120YDR407C YBR144CP34215 104 aa2.49□□□□□ -2.01
TRS120YDR407C YBL081WP38180 368 aaKnown RBP2.49□□□□□ -2.01
TRS120YDR407C IGD1P43598 195 aa2.49□□□□□ -2.01
TRS120YDR407C YHR139C-AO13536 103 aa2.49□□□□□ -2.01
TRS120YDR407C TOM6P33448 61 aa2.49□□□□□ -2.01
TRS120YDR407C YCR041WP37265 110 aa2.49□□□□□ -2.01
TRS120YDR407C KNH1P50112 268 aa2.49□□□□□ -2.01
TRS120YDR407C ENV10Q99382 181 aa2.48□□□□□ -2.01
TRS120YDR407C ATP18P81450 59 aa2.48□□□□□ -2.01
TRS120YDR407C HAL1Q01766 294 aa2.48□□□□□ -2.01
TRS120YDR407C HUR1P45820 110 aa2.47□□□□□ -2.01
TRS120YDR407C RSM19P53733 91 aaPredicted RBP2.47□□□□□ -2.01
TRS120YDR407C YHL042WP38729 150 aa2.46□□□□□ -2.01
TRS120YDR407C YMR320WQ04897 101 aa2.46□□□□□ -2.01
TRS120YDR407C TDA8Q6B2U8 126 aa2.46□□□□□ -2.02
TRS120YDR407C YGL015CP33199 130 aa2.46□□□□□ -2.02
TRS120YDR407C DSE2P38844 325 aa2.46□□□□□ -2.02
TRS120YDR407C YPR010C-AA5Z2X5 72 aa2.45□□□□□ -2.02
TRS120YDR407C YKL069WP36088 180 aa2.45□□□□□ -2.02
TRS120YDR407C YIL059CP40520 121 aa2.45□□□□□ -2.02
TRS120YDR407C ABF2Q02486 183 aa2.45□□□□□ -2.02
TRS120YDR407C YOL166W-AQ8TGJ1 51 aa2.45□□□□□ -2.02
TRS120YDR407C INO4P13902 151 aa2.45□□□□□ -2.02
TRS120YDR407C RTG1P32607 177 aa2.44□□□□□ -2.02
TRS120YDR407C YSY6P38374 65 aa2.44□□□□□ -2.02
TRS120YDR407C MPC3P53311 146 aa2.44□□□□□ -2.02
TRS120YDR407C CRC1Q12289 327 aa2.43□□□□□ -2.02
TRS120YDR407C YBR230W-AQ3E762 66 aa2.43□□□□□ -2.02
TRS120YDR407C COX23P38824 151 aa2.43□□□□□ -2.02
TRS120YDR407C TIM10P87108 93 aa2.43□□□□□ -2.02
TRS120YDR407C YJR107C-AP0CT86 78 aa2.43□□□□□ -2.02
TRS120YDR407C YFL019CP43576 117 aa2.43□□□□□ -2.02
TRS120YDR407C YOR034C-AQ3E735 80 aa2.43□□□□□ -2.02
TRS120YDR407C YDR182W-AQ3E796 67 aa2.43□□□□□ -2.02
TRS120YDR407C MVB12P42939 101 aa2.42□□□□□ -2.02
TRS120YDR407C RAD6P06104 172 aa2.42□□□□□ -2.02
TRS120YDR407C NUM1Q00402 2748 aa2.42□□□□□ -2.02
TRS120YDR407C YGL088WP53151 121 aa2.42□□□□□ -2.02
TRS120YDR407C SFT1P43682 97 aa2.41□□□□□ -2.02
TRS120YDR407C EDC1P53080 175 aaPredicted RBP2.41□□□□□ -2.02
TRS120YDR407C MET32Q12041 191 aa2.41□□□□□ -2.02
TRS120YDR407C YBL039W-BP0C268 59 aa2.41□□□□□ -2.02
TRS120YDR407C YOL014WQ08110 124 aa2.41□□□□□ -2.02
TRS120YDR407C URA2P07259 2214 aaKnown RBP2.41□□□□□ -2.02
TRS120YDR407C ECM12O13529 151 aa2.41□□□□□ -2.02
TRS120YDR407C PBI2P0CT04 75 aaKnown RBP2.41□□□□□ -2.02
TRS120YDR407C YEL045CP32616 141 aa2.4□□□□□ -2.02
TRS120YDR407C YGL193CP53097 103 aa2.4□□□□□ -2.02
TRS120YDR407C YHL018WP38744 120 aaPredicted RBP2.4□□□□□ -2.03
TRS120YDR407C MDN1Q12019 4910 aaKnown RBP2.4□□□□□ -2.03
TRS120YDR407C CUP1-1P0CX80 61 aa2.4□□□□□ -2.03
TRS120YDR407C CUP1-2P0CX81 61 aa2.4□□□□□ -2.03
TRS120YDR407C SGF11Q03067 99 aa2.4□□□□□ -2.03
TRS120YDR407C GIS2P53849 153 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
TRS120YDR407C HHF1P02309 103 aaKnown RBP2.39□□□□□ -2.03
TRS120YDR407C HOT13P36078 116 aa2.39□□□□□ -2.03
TRS120YDR407C FYV5P25585 152 aa2.39□□□□□ -2.03
TRS120YDR407C YBR209WP38311 105 aa2.39□□□□□ -2.03
TRS120YDR407C ECM19Q06011 112 aa2.38□□□□□ -2.03
TRS120YDR407C YLR162WQ06235 118 aa2.38□□□□□ -2.03
TRS120YDR407C YNL042W-BQ3E7Z2 85 aa2.38□□□□□ -2.03
TRS120YDR407C YGR164WP53291 111 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms