RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	COX9	P07255	59 aa		4.41	□□□□□ -1.7
SUB2	YDL084W	YFL051C	P43552	160 aa		4.41	□□□□□ -1.7
SUB2	YDL084W	YML122C	Q03207	126 aa		4.41	□□□□□ -1.7
SUB2	YDL084W	AIM26	P32858	118 aa		4.4	□□□□□ -1.71
SUB2	YDL084W	YBR209W	P38311	105 aa		4.4	□□□□□ -1.71
SUB2	YDL084W	FLO9	P39712	1322 aa		4.39	□□□□□ -1.71
SUB2	YDL084W	YFL012W	P43580	148 aa		4.39	□□□□□ -1.71
SUB2	YDL084W	RPS23A	P0CX29	145 aa	Known RBP	4.38	□□□□□ -1.71
SUB2	YDL084W	RPS23B	P0CX30	145 aa		4.38	□□□□□ -1.71
SUB2	YDL084W	YIR020C	P40575	100 aa		4.38	□□□□□ -1.71
SUB2	YDL084W	SED1	Q01589	338 aa		4.38	□□□□□ -1.71
SUB2	YDL084W	YMR122C	Q03879	124 aa		4.38	□□□□□ -1.71
SUB2	YDL084W	COA3	Q3E7B2	85 aa		4.38	□□□□□ -1.71
SUB2	YDL084W	RPL36B	O14455	100 aa	Known RBP	4.37	□□□□□ -1.71
SUB2	YDL084W	RPL36A	P05745	100 aa	Predicted RBP	4.37	□□□□□ -1.71
SUB2	YDL084W	YHR022C	P38763	256 aa		4.37	□□□□□ -1.71
SUB2	YDL084W	MIG3	P39943	394 aa		4.37	□□□□□ -1.71
SUB2	YDL084W	DCV1	P43595	202 aa		4.36	□□□□□ -1.71
SUB2	YDL084W	RPL26B	P53221	127 aa	Known RBP	4.36	□□□□□ -1.71
SUB2	YDL084W	YGR035W-A	Q45U48	73 aa		4.36	□□□□□ -1.71
SUB2	YDL084W	MPC2	P38857	129 aa		4.35	□□□□□ -1.71
SUB2	YDL084W	RPR2	P40571	144 aa		4.35	□□□□□ -1.71
SUB2	YDL084W	CRH1	P53301	507 aa		4.35	□□□□□ -1.71
SUB2	YDL084W	YDR182W-A	Q3E796	67 aa		4.35	□□□□□ -1.71
SUB2	YDL084W	YPR096C	O13587	100 aa		4.34	□□□□□ -1.71
SUB2	YDL084W	YJL197C-A	P0C5P0	93 aa		4.34	□□□□□ -1.71
SUB2	YDL084W	YHL037C	P38733	133 aa		4.34	□□□□□ -1.71
SUB2	YDL084W	YPR153W	Q06537	140 aa		4.34	□□□□□ -1.71
SUB2	YDL084W	YGL149W	P53116	101 aa		4.33	□□□□□ -1.72
SUB2	YDL084W	VPS68	Q12016	184 aa		4.33	□□□□□ -1.72
SUB2	YDL084W	PRM7	Q12459	698 aa		4.33	□□□□□ -1.72
SUB2	YDL084W	YLR285C-A	Q3E771	56 aa		4.33	□□□□□ -1.72
SUB2	YDL084W	SRX1	P36077	127 aa		4.32	□□□□□ -1.72
SUB2	YDL084W	YBL071C	P38185	102 aa		4.32	□□□□□ -1.72
SUB2	YDL084W	PAU7	P39545	55 aa		4.32	□□□□□ -1.72
SUB2	YDL084W	COA2	Q3E823	68 aa		4.32	□□□□□ -1.72
SUB2	YDL084W	HSP150	P32478	413 aa		4.31	□□□□□ -1.72
SUB2	YDL084W	YPI1	P43587	155 aa		4.31	□□□□□ -1.72
SUB2	YDL084W	YNR077C	P53758	84 aa		4.31	□□□□□ -1.72
SUB2	YDL084W	IRC21	Q04772	201 aa		4.31	□□□□□ -1.72
SUB2	YDL084W	YDL241W	Q07738	123 aa		4.31	□□□□□ -1.72
SUB2	YDL084W	YGR269W	P40326	108 aa		4.3	□□□□□ -1.72
SUB2	YDL084W	REE1	P40893	198 aa		4.3	□□□□□ -1.72
SUB2	YDL084W	YOL029C	Q08187	201 aa		4.3	□□□□□ -1.72
SUB2	YDL084W	COX23	P38824	151 aa		4.29	□□□□□ -1.72
SUB2	YDL084W	YCR095W-A	Q3E787	52 aa		4.29	□□□□□ -1.72
SUB2	YDL084W	CDC39	P25655	2108 aa	Known RBP	4.28	□□□□□ -1.72
SUB2	YDL084W	RTC6	O14464	93 aa		4.28	□□□□□ -1.72
SUB2	YDL084W	MRPL38	P35996	138 aa	Predicted RBP	4.28	□□□□□ -1.72
SUB2	YDL084W	YNL208W	P40159	199 aa	Known RBP	4.28	□□□□□ -1.72
SUB2	YDL084W	SNA2	P56508	79 aa		4.28	□□□□□ -1.72
SUB2	YDL084W	YIL163C	P40448	117 aa		4.27	□□□□□ -1.73
SUB2	YDL084W	SPC1	P46965	94 aa		4.27	□□□□□ -1.73
SUB2	YDL084W	YOR192C-C	Q3E736	78 aa		4.27	□□□□□ -1.73
SUB2	YDL084W	YHR125W	P38831	101 aa		4.26	□□□□□ -1.73
SUB2	YDL084W	YEL067C	P39978	195 aa		4.26	□□□□□ -1.73
SUB2	YDL084W	YLR194C	Q05777	254 aa		4.26	□□□□□ -1.73
SUB2	YDL084W	YPR013C	Q12145	317 aa		4.26	□□□□□ -1.73
SUB2	YDL084W	MRX7	P53869	86 aa		4.25	□□□□□ -1.73
SUB2	YDL084W	EDC1	P53080	175 aa	Predicted RBP	4.23	□□□□□ -1.73
SUB2	YDL084W	YMR321C	Q04898	105 aa		4.23	□□□□□ -1.73
SUB2	YDL084W	YER078W-A	Q3E7A2	54 aa		4.22	□□□□□ -1.73
SUB2	YDL084W	NOP10	Q6Q547	58 aa	Predicted RBP	4.22	□□□□□ -1.73
SUB2	YDL084W	QCR8	P08525	94 aa		4.21	□□□□□ -1.73
SUB2	YDL084W	HMRA2	P0CY13	119 aa		4.21	□□□□□ -1.73
SUB2	YDL084W	POR2	P40478	281 aa		4.21	□□□□□ -1.73
SUB2	YDL084W	YMR007W	Q03675	126 aa		4.21	□□□□□ -1.73
SUB2	YDL084W	YCL048W-A	Q2V2Q2	79 aa		4.21	□□□□□ -1.73
SUB2	YDL084W	RPS30A	P0CX33	63 aa	Known RBP	4.21	□□□□□ -1.74
SUB2	YDL084W	RPS30B	P0CX34	63 aa	Known RBP	4.21	□□□□□ -1.74
SUB2	YDL084W	HOT13	P36078	116 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	BSC4	P53841	131 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	YMR244W	Q04018	355 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	YDR010C	Q12426	110 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	YIL156W-B	Q2V2P4	73 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	YOL166W-A	Q8TGJ1	51 aa		4.21	□□□□□ -1.74
SUB2	YDL084W	BPH1	P25356	2167 aa		4.2	□□□□□ -1.74
SUB2	YDL084W	YCR022C	P25620	114 aa		4.2	□□□□□ -1.74
SUB2	YDL084W	YLR111W	Q12528	110 aa		4.2	□□□□□ -1.74
SUB2	YDL084W	YBR027C	P38220	110 aa		4.19	□□□□□ -1.74
SUB2	YDL084W	KRE9	P39005	276 aa		4.19	□□□□□ -1.74
SUB2	YDL084W	YDL022C-A	P0C5L6	82 aa		4.18	□□□□□ -1.74
SUB2	YDL084W	IGD1	P43598	195 aa		4.18	□□□□□ -1.74
SUB2	YDL084W	YJR085C	P47131	105 aa	Known RBP	4.18	□□□□□ -1.74
SUB2	YDL084W	FIG2	P25653	1609 aa		4.18	□□□□□ -1.74
SUB2	YDL084W	HUB1	Q6Q546	73 aa		4.17	□□□□□ -1.74
SUB2	YDL084W	API2	Q04413	109 aa		4.16	□□□□□ -1.74
SUB2	YDL084W	YDR115W	Q04598	105 aa		4.16	□□□□□ -1.74
SUB2	YDL084W	YOR032W-A	Q8TGS1	66 aa		4.16	□□□□□ -1.74
SUB2	YDL084W	MGR2	Q02889	113 aa		4.15	□□□□□ -1.75
SUB2	YDL084W	FIT2	Q08906	153 aa		4.15	□□□□□ -1.75
SUB2	YDL084W	YLR236C	A0A023PZG4	107 aa		4.14	□□□□□ -1.75
SUB2	YDL084W	YNL042W-B	Q3E7Z2	85 aa		4.14	□□□□□ -1.75
SUB2	YDL084W	FLO1	P32768	1537 aa		4.14	□□□□□ -1.75
SUB2	YDL084W	YHR032W-A	P0C5N6	59 aa		4.13	□□□□□ -1.75
SUB2	YDL084W	SHU1	P38751	150 aa		4.13	□□□□□ -1.75
SUB2	YDL084W	CCW14	O13547	238 aa		4.12	□□□□□ -1.75
SUB2	YDL084W	YCR001W	P25347	104 aa		4.12	□□□□□ -1.75
SUB2	YDL084W	RPS11A	P0CX47	156 aa	Known RBP	4.11	□□□□□ -1.75
SUB2	YDL084W	RPS11B	P0CX48	156 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms