RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C SHU1P38751 150 aa0.83□□□□□ -2.28
VAM6YDL077C YIL163CP40448 117 aa0.83□□□□□ -2.28
VAM6YDL077C TRS23Q03784 219 aa0.83□□□□□ -2.28
VAM6YDL077C MRPS8Q03799 155 aa0.83□□□□□ -2.28
VAM6YDL077C YMR244WQ04018 355 aa0.83□□□□□ -2.28
VAM6YDL077C CCW12Q12127 133 aa0.83□□□□□ -2.28
VAM6YDL077C YGR121W-AQ3E816 71 aa0.83□□□□□ -2.28
VAM6YDL077C RPL26AP05743 127 aaKnown RBP0.83□□□□□ -2.28
VAM6YDL077C YEL067CP39978 195 aa0.83□□□□□ -2.28
VAM6YDL077C RPR2P40571 144 aa0.83□□□□□ -2.28
VAM6YDL077C IMP2P46972 177 aa0.83□□□□□ -2.28
VAM6YDL077C ICS3P47034 131 aa0.83□□□□□ -2.28
VAM6YDL077C DAD4P69851 72 aa0.83□□□□□ -2.28
VAM6YDL077C HSK3P69852 69 aa0.83□□□□□ -2.28
VAM6YDL077C YMR295CQ03559 197 aa0.83□□□□□ -2.28
VAM6YDL077C ATP20Q12233 115 aa0.83□□□□□ -2.28
VAM6YDL077C YGR035W-AQ45U48 73 aa0.83□□□□□ -2.28
VAM6YDL077C MIC10Q96VH5 97 aa0.83□□□□□ -2.28
VAM6YDL077C YKR032WP36127 104 aa0.82□□□□□ -2.28
VAM6YDL077C YCL048W-AQ2V2Q2 79 aa0.82□□□□□ -2.28
VAM6YDL077C YOL166W-AQ8TGJ1 51 aa0.82□□□□□ -2.28
VAM6YDL077C YER188C-AP0C0V2 99 aa0.82□□□□□ -2.28
VAM6YDL077C YJR107C-AP0CT86 78 aa0.82□□□□□ -2.28
VAM6YDL077C YCR001WP25347 104 aa0.82□□□□□ -2.28
VAM6YDL077C ARC15P40518 154 aaRIP-Chip data0.82□□□□□ -2.28not detected
VAM6YDL077C YJR146WP47174 117 aa0.82□□□□□ -2.28
VAM6YDL077C YGL149WP53116 101 aa0.82□□□□□ -2.28
VAM6YDL077C RPC11Q04307 110 aaPredicted RBP0.82□□□□□ -2.28
VAM6YDL077C NAG1Q8TGN9 163 aa0.82□□□□□ -2.28
VAM6YDL077C YJL197C-AP0C5P0 93 aa0.82□□□□□ -2.28
VAM6YDL077C YEL045CP32616 141 aa0.82□□□□□ -2.28
VAM6YDL077C RRT1P38192 103 aa0.82□□□□□ -2.28
VAM6YDL077C REE1P40893 198 aa0.82□□□□□ -2.28
VAM6YDL077C ATP18P81450 59 aa0.82□□□□□ -2.28
VAM6YDL077C YDR274CP87283 123 aa0.82□□□□□ -2.28
VAM6YDL077C YOL160WQ08321 113 aa0.82□□□□□ -2.28
VAM6YDL077C YBR182C-AQ8TGU6 64 aa0.82□□□□□ -2.28
VAM6YDL077C OST5Q92316 86 aa0.82□□□□□ -2.28
VAM6YDL077C RPL11AP0C0W9 174 aaKnown RBP0.81□□□□□ -2.28
VAM6YDL077C TDA2P40045 126 aa0.81□□□□□ -2.28
VAM6YDL077C KEG1P43614 200 aa0.81□□□□□ -2.28
VAM6YDL077C YGL088WP53151 121 aa0.81□□□□□ -2.28
VAM6YDL077C NRM1P53718 249 aa0.81□□□□□ -2.28
VAM6YDL077C RPL11BQ3E757 174 aaPredicted RBP0.81□□□□□ -2.28
VAM6YDL077C YLR285C-AQ3E771 56 aa0.81□□□□□ -2.28
VAM6YDL077C YBL112CQ3E7Y4 105 aa0.81□□□□□ -2.28
VAM6YDL077C YLR156WP0CE96 114 aa0.81□□□□□ -2.28
VAM6YDL077C YLR159WP0CE97 114 aa0.81□□□□□ -2.28
VAM6YDL077C YLR161WP0CE98 114 aa0.81□□□□□ -2.28
VAM6YDL077C DSE2P38844 325 aa0.81□□□□□ -2.28
VAM6YDL077C YFL019CP43576 117 aa0.81□□□□□ -2.28
VAM6YDL077C RPL26BP53221 127 aaKnown RBP0.81□□□□□ -2.28
VAM6YDL077C YNL190WP53872 204 aa0.81□□□□□ -2.28
VAM6YDL077C ERI1P62651 68 aaKnown RBP0.81□□□□□ -2.28
VAM6YDL077C SED1Q01589 338 aa0.81□□□□□ -2.28
VAM6YDL077C YMR122CQ03879 124 aa0.81□□□□□ -2.28
VAM6YDL077C YLR111WQ12528 110 aa0.81□□□□□ -2.28
VAM6YDL077C YSF3P0C074 85 aaPredicted RBP0.8□□□□□ -2.28
VAM6YDL077C RPS11AP0CX47 156 aaKnown RBP0.8□□□□□ -2.28
VAM6YDL077C RPS11BP0CX48 156 aaKnown RBP0.8□□□□□ -2.28
VAM6YDL077C COX23P38824 151 aa0.8□□□□□ -2.28
VAM6YDL077C TVP23P38962 199 aa0.8□□□□□ -2.28
VAM6YDL077C COX14P39103 70 aa0.8□□□□□ -2.28
VAM6YDL077C YJL027CP47063 138 aaPredicted RBP0.8□□□□□ -2.28
VAM6YDL077C TOM7P53507 60 aa0.8□□□□□ -2.28
VAM6YDL077C LEE1Q02799 301 aaKnown RBP0.8□□□□□ -2.28
VAM6YDL077C LIP1Q03579 150 aa0.8□□□□□ -2.28
VAM6YDL077C HOR7Q05827 59 aa0.8□□□□□ -2.28
VAM6YDL077C YOR381W-AQ3E804 55 aa0.8□□□□□ -2.28
VAM6YDL077C RPS23AP0CX29 145 aaKnown RBP0.8□□□□□ -2.28
VAM6YDL077C RPS23BP0CX30 145 aa0.8□□□□□ -2.28
VAM6YDL077C FYV5P25585 152 aa0.8□□□□□ -2.28
VAM6YDL077C VTC1P40046 129 aaRIP-Chip data0.8□□□□□ -2.28 RIP-Chip
VAM6YDL077C POR2P40478 281 aa0.8□□□□□ -2.28
VAM6YDL077C EAF6P47128 113 aa0.8□□□□□ -2.28
VAM6YDL077C ATP17Q06405 101 aa0.8□□□□□ -2.28
VAM6YDL077C YOL014WQ08110 124 aa0.8□□□□□ -2.28
VAM6YDL077C YOL097W-AQ3E7Y9 61 aa0.8□□□□□ -2.28
VAM6YDL077C YBL008W-AQ3E821 79 aa0.8□□□□□ -2.28
VAM6YDL077C QCR10P37299 77 aa0.8□□□□□ -2.28
VAM6YDL077C EDC2P40023 145 aaPredicted RBP0.8□□□□□ -2.28
VAM6YDL077C RDS3Q06835 107 aaPredicted RBP0.8□□□□□ -2.28
VAM6YDL077C YNL146C-AQ3E7Z1 64 aa0.8□□□□□ -2.28
VAM6YDL077C NOP10Q6Q547 58 aaPredicted RBP0.8□□□□□ -2.28
VAM6YDL077C YAR023CD6VPM8 179 aa0.79□□□□□ -2.28
VAM6YDL077C MRX7P53869 86 aa0.79□□□□□ -2.28
VAM6YDL077C YBR200W-AQ3E755 54 aa0.79□□□□□ -2.28
VAM6YDL077C YPR010C-AA5Z2X5 72 aa0.79□□□□□ -2.28
VAM6YDL077C ATP15P21306 62 aa0.79□□□□□ -2.28
VAM6YDL077C BSC4P53841 131 aa0.79□□□□□ -2.28
VAM6YDL077C YOR192C-CQ3E736 78 aa0.79□□□□□ -2.28
VAM6YDL077C SDH6Q3E785 79 aa0.79□□□□□ -2.28
VAM6YDL077C YOL013W-AP0C272 63 aaPredicted RBP0.78□□□□□ -2.28
VAM6YDL077C YFR009W-AP0C5M9 85 aa0.78□□□□□ -2.28
VAM6YDL077C YEL008WP40001 126 aa0.78□□□□□ -2.28
VAM6YDL077C YIL086CP40503 102 aa0.78□□□□□ -2.28
VAM6YDL077C SOM1Q05676 74 aa0.78□□□□□ -2.28
VAM6YDL077C YNL162W-AQ3E7A8 72 aa0.78□□□□□ -2.28
VAM6YDL077C FAS1P07149 2051 aaKnown RBP0.78□□□□□ -2.28
VAM6YDL077C RPL15AP05748 204 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms