RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W HUR1P45820 110 aa5.83□□□□□ -1.48
ABP1YCR088W RGM1Q00453 211 aa5.83□□□□□ -1.48
ABP1YCR088W CWP2P43497 92 aa5.82□□□□□ -1.48
ABP1YCR088W KRE1P17260 313 aa5.81□□□□□ -1.48
ABP1YCR088W SKI6P46948 246 aaPredicted RBP5.81□□□□□ -1.48
ABP1YCR088W MRPL24P36525 258 aaPredicted RBP5.8□□□□□ -1.48
ABP1YCR088W MPC2P38857 129 aa5.8□□□□□ -1.48
ABP1YCR088W YAR1P46683 200 aa5.8□□□□□ -1.48
ABP1YCR088W HAL1Q01766 294 aa5.8□□□□□ -1.48
ABP1YCR088W VAM10Q08474 114 aa5.8□□□□□ -1.48
ABP1YCR088W PBI2P0CT04 75 aaKnown RBP5.8□□□□□ -1.48
ABP1YCR088W YCR085WP25650 117 aa5.8□□□□□ -1.48
ABP1YCR088W SVP26P38869 228 aa5.8□□□□□ -1.48
ABP1YCR088W YDR381C-AQ3E6R5 114 aa5.8□□□□□ -1.48
ABP1YCR088W YFL041W-AQ3E817 63 aa5.8□□□□□ -1.48
ABP1YCR088W YCR001WP25347 104 aa5.79□□□□□ -1.48
ABP1YCR088W UBC11P52492 156 aa5.79□□□□□ -1.48
ABP1YCR088W TOA2P32774 122 aa5.78□□□□□ -1.48
ABP1YCR088W RPR2P40571 144 aa5.78□□□□□ -1.48
ABP1YCR088W PBA1Q05778 276 aa5.78□□□□□ -1.48
ABP1YCR088W PPT2Q12036 173 aa5.78□□□□□ -1.48
ABP1YCR088W YLL006W-AQ3E814 58 aa5.78□□□□□ -1.48
ABP1YCR088W MSA2P36157 363 aa5.78□□□□□ -1.48
ABP1YCR088W YBL112CQ3E7Y4 105 aa5.78□□□□□ -1.48
ABP1YCR088W YMR122W-AQ3E842 84 aa5.77□□□□□ -1.49
ABP1YCR088W YHR139C-AO13536 103 aa5.76□□□□□ -1.49
ABP1YCR088W YAR029WP39549 74 aa5.75□□□□□ -1.49
ABP1YCR088W TOR1P35169 2470 aa5.75□□□□□ -1.49
ABP1YCR088W YDL186WP48568 277 aa5.74□□□□□ -1.49
ABP1YCR088W YDR274CP87283 123 aa5.74□□□□□ -1.49
ABP1YCR088W COX12Q01519 83 aa5.74□□□□□ -1.49
ABP1YCR088W YAL065CO13511 128 aa5.73□□□□□ -1.49
ABP1YCR088W YBR144CP34215 104 aa5.73□□□□□ -1.49
ABP1YCR088W YDR119W-AQ2V2P9 66 aa5.73□□□□□ -1.49
ABP1YCR088W YOR020W-AQ3E824 90 aa5.73□□□□□ -1.49
ABP1YCR088W YLR236CA0A023PZG4 107 aa5.72□□□□□ -1.49
ABP1YCR088W YOR304C-AO14468 76 aa5.72□□□□□ -1.49
ABP1YCR088W YGR240C-AQ3E786 66 aa5.72□□□□□ -1.49
ABP1YCR088W YGR039WP53225 103 aa5.71□□□□□ -1.5
ABP1YCR088W IRC21Q04772 201 aa5.71□□□□□ -1.5
ABP1YCR088W YBR126W-AQ8TGU7 68 aa5.71□□□□□ -1.5
ABP1YCR088W SMP1P38128 452 aa5.7□□□□□ -1.5
ABP1YCR088W KNH1P50112 268 aa5.7□□□□□ -1.5
ABP1YCR088W YPL080CQ02826 108 aa5.7□□□□□ -1.5
ABP1YCR088W ENV10Q99382 181 aa5.7□□□□□ -1.5
ABP1YCR088W NUM1Q00402 2748 aa5.69□□□□□ -1.5
ABP1YCR088W MPC3P53311 146 aa5.69□□□□□ -1.5
ABP1YCR088W CRC1Q12289 327 aa5.69□□□□□ -1.5
ABP1YCR088W RAD6P06104 172 aa5.68□□□□□ -1.5
ABP1YCR088W YJR107C-AP0CT86 78 aa5.67□□□□□ -1.5
ABP1YCR088W YBL081WP38180 368 aaKnown RBP5.67□□□□□ -1.5
ABP1YCR088W ERI1P62651 68 aaKnown RBP5.67□□□□□ -1.5
ABP1YCR088W COF1Q03048 143 aaKnown RBP5.67□□□□□ -1.5
ABP1YCR088W EDC1P53080 175 aaPredicted RBP5.66□□□□□ -1.5
ABP1YCR088W YMR175W-AQ3E766 64 aa5.65□□□□□ -1.5
ABP1YCR088W UTP20P35194 2493 aaKnown RBP5.65□□□□□ -1.51
ABP1YCR088W ERG28P40030 148 aa5.65□□□□□ -1.51
ABP1YCR088W ICY1Q04329 127 aa5.65□□□□□ -1.51
ABP1YCR088W YMR320WQ04897 101 aa5.65□□□□□ -1.51
ABP1YCR088W RDS3Q06835 107 aaPredicted RBP5.65□□□□□ -1.51
ABP1YCR088W YKL069WP36088 180 aa5.64□□□□□ -1.51
ABP1YCR088W YGR035W-AQ45U48 73 aa5.64□□□□□ -1.51
ABP1YCR088W YHL042WP38729 150 aa5.63□□□□□ -1.51
ABP1YCR088W YAL064WP39711 94 aa5.63□□□□□ -1.51
ABP1YCR088W RPC10P40422 70 aa5.63□□□□□ -1.51
ABP1YCR088W MVB12P42939 101 aa5.63□□□□□ -1.51
ABP1YCR088W SMD1Q02260 146 aaPredicted RBP5.63□□□□□ -1.51
ABP1YCR088W EMC6Q12431 108 aa5.63□□□□□ -1.51
ABP1YCR088W RPL29P05747 59 aaPredicted RBP5.62□□□□□ -1.51
ABP1YCR088W DIF1O13577 133 aa5.61□□□□□ -1.51
ABP1YCR088W ATP18P81450 59 aa5.61□□□□□ -1.51
ABP1YCR088W YDL241WQ07738 123 aa5.61□□□□□ -1.51
ABP1YCR088W RPL33AP05744 107 aaKnown RBP5.6□□□□□ -1.51
ABP1YCR088W YHL018WP38744 120 aaPredicted RBP5.6□□□□□ -1.51
ABP1YCR088W GAT4P40569 121 aa5.6□□□□□ -1.51
ABP1YCR088W RPL33BP41056 107 aaKnown RBP5.6□□□□□ -1.51
ABP1YCR088W SGF11Q03067 99 aa5.6□□□□□ -1.51
ABP1YCR088W YDR029WQ12111 104 aa5.6□□□□□ -1.51
ABP1YCR088W SHH4Q06236 168 aa5.6□□□□□ -1.51
ABP1YCR088W YNL162W-AQ3E7A8 72 aa5.6□□□□□ -1.51
ABP1YCR088W YPL038W-AQ3E7B4 63 aa5.6□□□□□ -1.51
ABP1YCR088W YDR115WQ04598 105 aa5.59□□□□□ -1.51
ABP1YCR088W YLR285C-AQ3E771 56 aa5.59□□□□□ -1.51
ABP1YCR088W YFR009W-AP0C5M9 85 aa5.58□□□□□ -1.52
ABP1YCR088W AQY2P0CD90 149 aa5.58□□□□□ -1.52
ABP1YCR088W YLR281CQ05863 155 aa5.57□□□□□ -1.52
ABP1YCR088W YSY6P38374 65 aa5.57□□□□□ -1.52
ABP1YCR088W YLL066W-BQ8TGJ7 56 aa5.57□□□□□ -1.52
ABP1YCR088W YCL042WP25572 119 aa5.56□□□□□ -1.52
ABP1YCR088W YFL019CP43576 117 aa5.56□□□□□ -1.52
ABP1YCR088W IGD1P43598 195 aa5.56□□□□□ -1.52
ABP1YCR088W YLR156WP0CE96 114 aa5.55□□□□□ -1.52
ABP1YCR088W YLR159WP0CE97 114 aa5.55□□□□□ -1.52
ABP1YCR088W YLR161WP0CE98 114 aa5.55□□□□□ -1.52
ABP1YCR088W RRT15Q3E811 62 aa5.55□□□□□ -1.52
ABP1YCR088W YBL039W-BP0C268 59 aa5.55□□□□□ -1.52
ABP1YCR088W CUP1-1P0CX80 61 aa5.55□□□□□ -1.52
ABP1YCR088W CUP1-2P0CX81 61 aa5.55□□□□□ -1.52
ABP1YCR088W YIR021W-AQ3E739 70 aa5.55□□□□□ -1.52
ABP1YCR088W UBC4P15731 148 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 100.7 ms