RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C HSP150P32478 413 aa4.03□□□□□ -1.76
PDB1YBR221C ATX1P38636 73 aa4.03□□□□□ -1.76
PDB1YBR221C CUE4Q04201 117 aaPredicted RBP4.03□□□□□ -1.76
PDB1YBR221C YDL157CQ12082 118 aa4.03□□□□□ -1.76
PDB1YBR221C SLH1P53327 1967 aaKnown RBP4.02□□□□□ -1.77
PDB1YBR221C SOD1P00445 154 aaKnown RBP4.02□□□□□ -1.77
PDB1YBR221C YBR209WP38311 105 aa4.02□□□□□ -1.77
PDB1YBR221C GCV3P39726 170 aaPredicted RBP4.02□□□□□ -1.77
PDB1YBR221C MRPS16Q02608 121 aa4.02□□□□□ -1.77
PDB1YBR221C BPH1P25356 2167 aa4.02□□□□□ -1.77
PDB1YBR221C CCW14O13547 238 aa4.01□□□□□ -1.77
PDB1YBR221C ATG8P38182 117 aaRIP-Chip data4.01□□□□□ -1.77not detected
PDB1YBR221C MET31Q03081 177 aa4.01□□□□□ -1.77
PDB1YBR221C ICY1Q04329 127 aa4.01□□□□□ -1.77
PDB1YBR221C YDR119W-AQ2V2P9 66 aa4.01□□□□□ -1.77
PDB1YBR221C PCC1Q3E833 88 aa4.01□□□□□ -1.77
PDB1YBR221C PAU24P38155 120 aa4□□□□□ -1.77
PDB1YBR221C YFL051CP43552 160 aa4□□□□□ -1.77
PDB1YBR221C YPI1P43587 155 aa4□□□□□ -1.77
PDB1YBR221C NCE101Q02820 53 aa4□□□□□ -1.77
PDB1YBR221C AVO2Q04749 426 aa4□□□□□ -1.77
PDB1YBR221C PAU23Q07987 124 aa4□□□□□ -1.77
PDB1YBR221C PAU17Q12370 124 aa4□□□□□ -1.77
PDB1YBR221C YPR096CO13587 100 aa3.99□□□□□ -1.77
PDB1YBR221C PAU16P35994 123 aa3.99□□□□□ -1.77
PDB1YBR221C PAU15P40585 124 aa3.99□□□□□ -1.77
PDB1YBR221C RGM1Q00453 211 aa3.99□□□□□ -1.77
PDB1YBR221C RPL36BO14455 100 aaKnown RBP3.98□□□□□ -1.77
PDB1YBR221C RPL36AP05745 100 aaPredicted RBP3.98□□□□□ -1.77
PDB1YBR221C YJL197C-AP0C5P0 93 aa3.98□□□□□ -1.77
PDB1YBR221C DAD4P69851 72 aa3.98□□□□□ -1.77
PDB1YBR221C YPR195CQ06594 109 aa3.98□□□□□ -1.77
PDB1YBR221C RTC6O14464 93 aa3.97□□□□□ -1.77
PDB1YBR221C UTR5P32630 166 aa3.97□□□□□ -1.77
PDB1YBR221C YIR020CP40575 100 aa3.97□□□□□ -1.77
PDB1YBR221C ICS3P47034 131 aa3.97□□□□□ -1.77
PDB1YBR221C YIL014C-AQ02598 104 aa3.97□□□□□ -1.77
PDB1YBR221C RPB7P34087 171 aa3.96□□□□□ -1.78
PDB1YBR221C YJL027CP47063 138 aaPredicted RBP3.96□□□□□ -1.78
PDB1YBR221C COX8P04039 78 aa3.95□□□□□ -1.78
PDB1YBR221C SEC11P15367 167 aa3.95□□□□□ -1.78
PDB1YBR221C MRPS9P38120 278 aa3.95□□□□□ -1.78
PDB1YBR221C IMP2P46972 177 aa3.95□□□□□ -1.78
PDB1YBR221C MIC27P50945 234 aa3.95□□□□□ -1.78
PDB1YBR221C YOL118CQ08259 102 aa3.95□□□□□ -1.78
PDB1YBR221C MHF2Q3E829 80 aa3.95□□□□□ -1.78
PDB1YBR221C YIL134C-AQ45U18 67 aa3.95□□□□□ -1.78
PDB1YBR221C YBR292CP38357 123 aa3.94□□□□□ -1.78
PDB1YBR221C YLR194CQ05777 254 aa3.94□□□□□ -1.78
PDB1YBR221C YDR381C-AQ3E6R5 114 aa3.94□□□□□ -1.78
PDB1YBR221C COX23P38824 151 aa3.93□□□□□ -1.78
PDB1YBR221C YEL014CP39999 101 aa3.93□□□□□ -1.78
PDB1YBR221C PAU5P43575 122 aa3.93□□□□□ -1.78
PDB1YBR221C HPA2Q06592 156 aa3.93□□□□□ -1.78
PDB1YBR221C YNL162W-AQ3E7A8 72 aa3.93□□□□□ -1.78
PDB1YBR221C VMA9Q3E7B6 73 aa3.93□□□□□ -1.78
PDB1YBR221C RPL26AP05743 127 aaKnown RBP3.92□□□□□ -1.78
PDB1YBR221C YNR034W-AQ3E841 98 aa3.92□□□□□ -1.78
PDB1YBR221C QCR8P08525 94 aa3.91□□□□□ -1.78
PDB1YBR221C ROX3P25046 220 aa3.91□□□□□ -1.78
PDB1YBR221C YHR022CP38763 256 aa3.91□□□□□ -1.78
PDB1YBR221C SMX2P40204 77 aaKnown RBP3.91□□□□□ -1.78
PDB1YBR221C CMC4Q3E7A9 73 aa3.91□□□□□ -1.78
PDB1YBR221C YFL041W-AQ3E817 63 aa3.91□□□□□ -1.78
PDB1YBR221C MRP17P28778 131 aa3.9□□□□□ -1.79
PDB1YBR221C KRE9P39005 276 aa3.9□□□□□ -1.79
PDB1YBR221C YNL198CP40166 100 aa3.9□□□□□ -1.79
PDB1YBR221C FIT2Q08906 153 aa3.9□□□□□ -1.79
PDB1YBR221C RPL26BP53221 127 aaKnown RBP3.89□□□□□ -1.79
PDB1YBR221C CYT2Q00873 224 aa3.89□□□□□ -1.79
PDB1YBR221C YPL038W-AQ3E7B4 63 aa3.89□□□□□ -1.79
PDB1YBR221C RPS22AP0C0W1 130 aaKnown RBP3.88□□□□□ -1.79
PDB1YBR221C SIP18P50263 79 aa3.88□□□□□ -1.79
PDB1YBR221C YOR343CQ12484 108 aa3.88□□□□□ -1.79
PDB1YBR221C YPR145C-AQ2V2P0 78 aa3.88□□□□□ -1.79
PDB1YBR221C NHP2P32495 156 aaPredicted RBP3.87□□□□□ -1.79
PDB1YBR221C YER084WP40057 128 aa3.87□□□□□ -1.79
PDB1YBR221C SED1Q01589 338 aa3.87□□□□□ -1.79
PDB1YBR221C YDR114CQ04597 100 aa3.87□□□□□ -1.79
PDB1YBR221C POR2P40478 281 aa3.86□□□□□ -1.79
PDB1YBR221C YOR105WQ08504 108 aa3.86□□□□□ -1.79
PDB1YBR221C HMRA2P0CY13 119 aa3.85□□□□□ -1.79
PDB1YBR221C YBR027CP38220 110 aa3.85□□□□□ -1.79
PDB1YBR221C YKL018C-AQ3E7A7 99 aa3.84□□□□□ -1.79
PDB1YBR221C RPS22BQ3E7Y3 130 aaKnown RBP3.84□□□□□ -1.79
PDB1YBR221C COX12Q01519 83 aa3.83□□□□□ -1.8
PDB1YBR221C LSM6Q06406 86 aaKnown RBP3.83□□□□□ -1.8
PDB1YBR221C YCR095W-AQ3E787 52 aa3.83□□□□□ -1.8
PDB1YBR221C LST8P41318 303 aa3.82□□□□□ -1.8
PDB1YBR221C YIL102C-AQ2V2P5 75 aa3.82□□□□□ -1.8
PDB1YBR221C PFY1P07274 126 aa3.81□□□□□ -1.8
PDB1YBR221C YJL144WP47009 104 aa3.81□□□□□ -1.8
PDB1YBR221C SNA2P56508 79 aa3.81□□□□□ -1.8
PDB1YBR221C YBR032WP38223 100 aa3.8□□□□□ -1.8
PDB1YBR221C YHR007C-AQ07074 71 aa3.8□□□□□ -1.8
PDB1YBR221C YOR314WQ12506 109 aa3.79□□□□□ -1.8
PDB1YBR221C YCL048W-AQ2V2Q2 79 aa3.79□□□□□ -1.8
PDB1YBR221C YLR285C-AQ3E771 56 aa3.79□□□□□ -1.8
PDB1YBR221C TIM12P32830 109 aa3.78□□□□□ -1.8
PDB1YBR221C PDX3P38075 228 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms