RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	STF1	P01098	86 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	QCR8	P08525	94 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	MRPL44	P19956	98 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	RPF1	P38805	295 aa	Known RBP	3.79	□□□□□ -1.8
ATG12	YBR217W	MVB12	P42939	101 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	YGL041C-B	Q3E750	60 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	COA6	Q3E846	104 aa		3.79	□□□□□ -1.8
ATG12	YBR217W	YPL073C	P40323	161 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	MSL1	P40567	111 aa	Predicted RBP	3.78	□□□□□ -1.8
ATG12	YBR217W	IGD1	P43598	195 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	YGL230C	P53074	147 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	YNL190W	P53872	204 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	YLL006W-A	Q3E814	58 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	Q0032	Q9ZZX7	96 aa		3.78	□□□□□ -1.8
ATG12	YBR217W	MBF1	O14467	151 aa	Known RBP	3.77	□□□□□ -1.81
ATG12	YBR217W	YBL039W-B	P0C268	59 aa		3.77	□□□□□ -1.81
ATG12	YBR217W	DDR48	P18899	430 aa	Known RBP	3.77	□□□□□ -1.81
ATG12	YBR217W	YKL044W	P36092	106 aa		3.77	□□□□□ -1.81
ATG12	YBR217W	AIM19	P40502	157 aa		3.77	□□□□□ -1.81
ATG12	YBR217W	YFL019C	P43576	117 aa		3.77	□□□□□ -1.81
ATG12	YBR217W	YNR077C	P53758	84 aa		3.77	□□□□□ -1.81
ATG12	YBR217W	UGX2	P32772	223 aa		3.76	□□□□□ -1.81
ATG12	YBR217W	YFR057W	P43625	151 aa		3.76	□□□□□ -1.81
ATG12	YBR217W	EOS1	P53938	366 aa		3.76	□□□□□ -1.81
ATG12	YBR217W	YML079W	Q03629	201 aa		3.76	□□□□□ -1.81
ATG12	YBR217W	IGO2	Q9P305	131 aa		3.76	□□□□□ -1.81
ATG12	YBR217W	HAP3	P13434	144 aa		3.75	□□□□□ -1.81
ATG12	YBR217W	MID2	P36027	376 aa		3.75	□□□□□ -1.81
ATG12	YBR217W	YDL157C	Q12082	118 aa		3.75	□□□□□ -1.81
ATG12	YBR217W	UBC11	P52492	156 aa		3.74	□□□□□ -1.81
ATG12	YBR217W	FUN14	P18411	198 aa		3.73	□□□□□ -1.81
ATG12	YBR217W	HPA2	Q06592	156 aa		3.73	□□□□□ -1.81
ATG12	YBR217W	NAT5	Q08689	176 aa		3.73	□□□□□ -1.81
ATG12	YBR217W	YGL193C	P53097	103 aa		3.72	□□□□□ -1.81
ATG12	YBR217W	YBL112C	Q3E7Y4	105 aa		3.72	□□□□□ -1.81
ATG12	YBR217W	RPL29	P05747	59 aa	Predicted RBP	3.71	□□□□□ -1.82
ATG12	YBR217W	ATP5	P09457	212 aa		3.71	□□□□□ -1.82
ATG12	YBR217W	YKL023C-A	Q2V2P3	75 aa		3.71	□□□□□ -1.82
ATG12	YBR217W	CPR1	P14832	162 aa	Known RBP	3.7	□□□□□ -1.82
ATG12	YBR217W	UBC4	P15731	148 aa		3.69	□□□□□ -1.82
ATG12	YBR217W	YCR007C	P25354	239 aa		3.69	□□□□□ -1.82
ATG12	YBR217W	FYV7	Q12247	151 aa		3.69	□□□□□ -1.82
ATG12	YBR217W	YDR010C	Q12426	110 aa		3.69	□□□□□ -1.82
ATG12	YBR217W	YIA6	P40556	373 aa		3.68	□□□□□ -1.82
ATG12	YBR217W	KNH1	P50112	268 aa		3.68	□□□□□ -1.82
ATG12	YBR217W	YGL149W	P53116	101 aa		3.68	□□□□□ -1.82
ATG12	YBR217W	YNL162W-A	Q3E7A8	72 aa		3.68	□□□□□ -1.82
ATG12	YBR217W	CGR1	P53188	120 aa		3.67	□□□□□ -1.82
ATG12	YBR217W	RGM1	Q00453	211 aa		3.67	□□□□□ -1.82
ATG12	YBR217W	PAU17	Q12370	124 aa		3.67	□□□□□ -1.82
ATG12	YBR217W	YLR415C	O13578	112 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	YLR156W	P0CE96	114 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	YLR159W	P0CE97	114 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	YLR161W	P0CE98	114 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	HYP2	P23301	157 aa	Known RBP	3.66	□□□□□ -1.82
ATG12	YBR217W	ELC1	Q03071	99 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	IRC21	Q04772	201 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	YOR020W-A	Q3E824	90 aa		3.66	□□□□□ -1.82
ATG12	YBR217W	COX10	P21592	462 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	ARO2	P28777	376 aa	Known RBP	3.65	□□□□□ -1.83
ATG12	YBR217W	SCM4	P32564	187 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	DDR2	P89113	61 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	ICY1	Q04329	127 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	MHR1	Q06630	226 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	YPL257W	Q08974	193 aa		3.65	□□□□□ -1.83
ATG12	YBR217W	RPL26A	P05743	127 aa	Known RBP	3.64	□□□□□ -1.83
ATG12	YBR217W	YER039C-A	P0CD97	72 aa		3.64	□□□□□ -1.83
ATG12	YBR217W	EDC2	P40023	145 aa	Predicted RBP	3.64	□□□□□ -1.83
ATG12	YBR217W	RPL26B	P53221	127 aa	Known RBP	3.64	□□□□□ -1.83
ATG12	YBR217W	YOR034C-A	Q3E735	80 aa		3.64	□□□□□ -1.83
ATG12	YBR217W	YHR130C	P38834	111 aa		3.63	□□□□□ -1.83
ATG12	YBR217W	LSM8	P47093	109 aa	Known RBP	3.63	□□□□□ -1.83
ATG12	YBR217W	YOR268C	Q08734	132 aa		3.63	□□□□□ -1.83
ATG12	YBR217W	YBR230W-A	Q3E762	66 aa		3.63	□□□□□ -1.83
ATG12	YBR217W	YNL042W-B	Q3E7Z2	85 aa		3.63	□□□□□ -1.83
ATG12	YBR217W	SPT4	P32914	102 aa	Predicted RBP	3.62	□□□□□ -1.83
ATG12	YBR217W	SAE3	P89114	91 aa		3.62	□□□□□ -1.83
ATG12	YBR217W	PAU23	Q07987	124 aa		3.62	□□□□□ -1.83
ATG12	YBR217W	YJL127C-B	Q3E828	52 aa		3.62	□□□□□ -1.83
ATG12	YBR217W	YJL197C-A	P0C5P0	93 aa		3.61	□□□□□ -1.83
ATG12	YBR217W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.61	□□□□□ -1.83
ATG12	YBR217W	FYV5	P25585	152 aa		3.6	□□□□□ -1.83
ATG12	YBR217W	SPG1	P50088	95 aa		3.6	□□□□□ -1.83
ATG12	YBR217W	BSC4	P53841	131 aa		3.6	□□□□□ -1.83
ATG12	YBR217W	YLR363W-A	Q3E747	85 aa		3.6	□□□□□ -1.83
ATG12	YBR217W	YGR121W-A	Q3E816	71 aa		3.6	□□□□□ -1.83
ATG12	YBR217W	YER181C	P40097	107 aa		3.59	□□□□□ -1.83
ATG12	YBR217W	YHR007C-A	Q07074	71 aa		3.58	□□□□□ -1.84
ATG12	YBR217W	KTI11	Q3E840	82 aa		3.58	□□□□□ -1.84
ATG12	YBR217W	PAI3	P01094	68 aa		3.57	□□□□□ -1.84
ATG12	YBR217W	KRE1	P17260	313 aa		3.57	□□□□□ -1.84
ATG12	YBR217W	NHP2	P32495	156 aa	Predicted RBP	3.57	□□□□□ -1.84
ATG12	YBR217W	YJR085C	P47131	105 aa	Known RBP	3.57	□□□□□ -1.84
ATG12	YBR217W	YLR236C	A0A023PZG4	107 aa		3.56	□□□□□ -1.84
ATG12	YBR217W	MRPL24	P36525	258 aa	Predicted RBP	3.56	□□□□□ -1.84
ATG12	YBR217W	MPC3	P53311	146 aa		3.56	□□□□□ -1.84
ATG12	YBR217W	YMR230W-A	Q3E7B5	62 aa		3.56	□□□□□ -1.84
ATG12	YBR217W	BET1	P22804	142 aa		3.55	□□□□□ -1.84
ATG12	YBR217W	HUR1	P45820	110 aa		3.55	□□□□□ -1.84
ATG12	YBR217W	LSM6	Q06406	86 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms