RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 NRLP54845 237 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 FKBP3Q00688 224 aaKnown RBP19.33■□□□□ 0.68
VCX3A-203ENST00000612369 LRRC63Q05C16 580 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 INCA1Q0VD86 236 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 TAF10Q12962 218 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 PON2Q15165 354 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 FUKQ8N0W3 1084 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 CPA6Q8N4T0 437 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 ZBTB44Q8NCP5 570 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 RIN3Q8TB24 985 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 ATRIPQ8WXE1 791 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 ELMO3Q96BJ8 720 aa19.33■□□□□ 0.68
VCX3A-203ENST00000612369 PTPRZ1P23471 2315 aaPredicted RBP19.33■□□□□ 0.68
VCX3A-203ENST00000612369 FAM186AA6NE01 2351 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 SLC16A3O15427 465 aaKnown RBP19.32■□□□□ 0.68
VCX3A-203ENST00000612369 OLFM2O95897 454 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 CXCL12P48061 93 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 IFNAR2P48551 515 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 SLC7A9P82251 487 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 STIM1Q13586 685 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 CCINQ13939 588 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 TRIM68Q6AZZ1 485 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 ADSSL1Q8N142 457 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 TTC39CQ8N584 583 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 SH3RF2Q8TEC5 729 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 KCNK16Q96T55 309 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 NT5C1AQ9BXI3 368 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 NIF3L1Q9GZT8 377 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 FAM124BQ9H5Z6 455 aaPredicted RBP19.32■□□□□ 0.68
VCX3A-203ENST00000612369 MMRN2Q9H8L6 949 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 DUS2Q9NX74 493 aaKnown RBP19.32■□□□□ 0.68
VCX3A-203ENST00000612369 IL37Q9NZH6 218 aa19.32■□□□□ 0.68
VCX3A-203ENST00000612369 TRDMT1O14717 391 aaKnown RBP19.31■□□□□ 0.68
VCX3A-203ENST00000612369 TNFRSF10BO14763 440 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 AP1G2O75843 785 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 PAPSS2O95340 614 aaPredicted RBP19.31■□□□□ 0.68
VCX3A-203ENST00000612369 OAS1P00973 400 aaKnown RBP19.31■□□□□ 0.68
VCX3A-203ENST00000612369 MXI1P50539 228 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 NR1H3Q13133 447 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 SNX30Q5VWJ9 437 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 ZC3H3Q8IXZ2 948 aaKnown RBP19.31■□□□□ 0.68
VCX3A-203ENST00000612369 FBXL13Q8NEE6 735 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 SLC2A14Q8TDB8 520 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 ATP2A3Q93084 1043 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 APOBEC3GQ9HC16 384 aaKnown RBP19.31■□□□□ 0.68
VCX3A-203ENST00000612369 CSNK1G1Q9HCP0 422 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 KRT82Q9NSB4 513 aa19.31■□□□□ 0.68
VCX3A-203ENST00000612369 FAM92AA1XBS5 289 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 OTOL1A6NHN0 477 aaPredicted RBP19.3■□□□□ 0.68
VCX3A-203ENST00000612369 PSMA7O14818 248 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 LILRB5O75023 590 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 ABL1P00519 1130 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 ARSAP15289 507 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 SLC5A3P53794 718 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 GRSF1Q12849 480 aaKnown RBP eCLIP19.3■□□□□ 0.68
VCX3A-203ENST00000612369 GAS6Q14393 721 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 EML3Q32P44 896 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 TMEM196Q5HYL7 178 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 WDR44Q5JSH3 913 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 ANKRD40Q6AI12 368 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 TSSK4Q6SA08 328 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 FBXO32Q969P5 355 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 DHTKD1Q96HY7 919 aaPredicted RBP19.3■□□□□ 0.68
VCX3A-203ENST00000612369 HNRNPABQ99729 332 aaKnown RBP19.3■□□□□ 0.68
VCX3A-203ENST00000612369 RNF38Q9H0F5 515 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 FBXO44Q9H4M3 255 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 ECT2Q9H8V3 914 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 RBM12Q9NTZ6 932 aaKnown RBP19.3■□□□□ 0.68
VCX3A-203ENST00000612369 RAB20Q9NX57 234 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 HMGXB4Q9UGU5 601 aa19.3■□□□□ 0.68
VCX3A-203ENST00000612369 HELZP42694 1942 aaKnown RBP19.29■□□□□ 0.68
VCX3A-203ENST00000612369 LEFTY2O00292 366 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 CILPO75339 1184 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 TDGF1P13385 188 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 CCDC130P13994 396 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 DRD1P21728 446 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 GJA4P35212 333 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 TUBP50607 506 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 IFRD2Q12894 506 aaPredicted RBP19.29■□□□□ 0.68
VCX3A-203ENST00000612369 DDX42Q86XP3 938 aaKnown RBP eCLIP19.29■□□□□ 0.68
VCX3A-203ENST00000612369 C12orf29Q8N999 325 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
VCX3A-203ENST00000612369 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 EEF2KMTQ96G04 330 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 SMOQ99835 787 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 WNT6Q9Y6F9 365 aa19.29■□□□□ 0.68
VCX3A-203ENST00000612369 SLC9A3R1O14745 358 aaPredicted RBP19.28■□□□□ 0.68
VCX3A-203ENST00000612369 NFATC1O95644 943 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 ZDHHC11BP0C7U3 371 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 FAM200BP0CF97 657 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 MAP3K7CLP57077 242 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 SATB1Q01826 763 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 ORC1Q13415 861 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 HECTD3Q5T447 861 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 FOXR2Q6PJQ5 311 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 SUMF1Q8NBK3 374 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 TTC16Q8NEE8 873 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 ZMIZ2Q8NF64 920 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 SCAMP5Q8TAC9 235 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 CHFRQ96EP1 664 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms