RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 CACNA2D4Q7Z3S7 1137 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 LRRTM4Q86VH4 590 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 PTRH1Q86Y79 214 aaKnown RBP4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 WDR63Q8IWG1 891 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 CD302Q8IX05 232 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 SPACA3Q8IXA5 215 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZBTB34Q8NCN2 500 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 CEP70Q8NHQ1 597 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 GRK7Q8WTQ7 553 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 FRAT1Q92837 279 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 RSF1Q96T23 1441 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 FOXQ1Q9C009 403 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 THAP9Q9H5L6 903 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 COPS7BQ9H9Q2 264 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 CERS4Q9HA82 394 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 SLC52A2Q9HAB3 445 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 CBX8Q9HC52 389 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRT84Q9NSB2 600 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 UCKL1Q9NWZ5 548 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 RTEL1Q9NZ71 1219 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 HSPBP1Q9NZL4 362 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 EHD3Q9NZN3 535 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 EHD2Q9NZN4 543 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 MORF4L1Q9UBU8 362 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 RAPGEFL1Q9UHV5 662 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 EXOC7Q9UPT5 735 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 PCDHB14Q9Y5E9 798 aa4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P26-201ENST00000560051 WDR19Q8NEZ3 1342 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PTPDC1A2A3K4 754 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 OR6C74A6NCV1 312 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 TCAF2A6NFQ2 919 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 TMEM221A6NGB7 291 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 SLC9B1P1A6NJY1 282 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 NPC1O15118 1278 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PGRMC2O15173 223 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 STRNO43815 780 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 DOK2O60496 412 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 EXOC3O60645 756 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CILPO75339 1184 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PAGE1O75459 146 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 FLOT1O75955 427 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 OR5F1O95221 314 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CRTAMO95727 393 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ITGB3P05106 788 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 POLBP06746 335 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZBTB48P10074 688 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 XRCC6P12956 609 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRT5P13647 590 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 GALP22466 123 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CNTFP26441 200 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ARNTP27540 789 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 RFC1P35251 1148 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PSMC2P35998 433 aaKnown RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PPARGP37231 505 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ADCYAP1R1P41586 468 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PRIM2P49643 509 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 DIO1P49895 249 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 SCNN1BP51168 640 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CASP5P51878 434 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PMS2P54278 862 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ACTR1AP61163 376 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 RPS26P62854 115 aaKnown RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CSNK2BP67870 215 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 TPM4P67936 248 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PHEXP78562 749 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 GFPT1Q06210 699 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAAP100Q0VG06 881 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 DNAJC3Q13217 504 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 KCNAB2Q13303 367 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ACVR2BQ13705 512 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 EFR3AQ14156 821 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 GNA13Q14344 377 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 NOLC1Q14978 699 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZYXQ15942 572 aaKnown RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 INSCQ1MX18 579 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 CCDC153Q494R4 210 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 LRRC23Q53EV4 343 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 USP39Q53GS9 565 aaKnown RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 PPP6R3Q5H9R7 873 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 FBXO47Q5MNV8 452 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 FYB2Q5VWT5 728 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 KIAA1211LQ6NV74 962 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 ARHGAP11AQ6P4F7 1023 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 AAGABQ6PD74 315 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 KLHL24Q6TFL4 600 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 NANOGNBQ7Z5D8 188 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 R3HCC1LQ7Z5L2 792 aaKnown RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 LUZP1Q86V48 1076 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM160B2Q86V87 743 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 HEATR4Q86WZ0 1026 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 APLFQ8IW19 511 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 MFN1Q8IWA4 741 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 SULF2Q8IWU5 870 aa4.75□□□□□ -1.65
HMGB3P26-201ENST00000560051 MCEMP1Q8IX19 187 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms