RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FAM92AA1XBS5 289 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 ZNF197O14709 1029 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 MOSPD3O75425 235 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 GABRR2P28476 465 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 CDC25CP30307 473 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 GPD2P43304 727 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 ZBED6P86452 979 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 RAB41Q5JT25 222 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 GAREM2Q75VX8 874 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 GET4Q7L5D6 327 aaPredicted RBP22.88■■□□□ 1.25
SNX1-206ENST00000559389 TMEM150AQ86TG1 271 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 ZNF677Q86XU0 584 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 SCAMP5Q8TAC9 235 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 ITFG1Q8TB96 612 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 SLC20A1Q8WUM9 679 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 TCEAL4Q96EI5 215 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 PHF7Q9BWX1 381 aaPredicted RBP22.88■■□□□ 1.25
SNX1-206ENST00000559389 AIPL1Q9NZN9 384 aa22.88■■□□□ 1.25
SNX1-206ENST00000559389 MRPS23Q9Y3D9 190 aaKnown RBP22.88■■□□□ 1.25
SNX1-206ENST00000559389 NCANO14594 1321 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 A0A1W2PRU2 124 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 F11P03951 625 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 CEBPBP17676 345 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 KRT9P35527 623 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 ARID5AQ03989 594 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 IFRD2Q12894 506 aaPredicted RBP22.87■■□□□ 1.25
SNX1-206ENST00000559389 SFMBT2Q5VUG0 894 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 TAF3Q5VWG9 929 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 PASD1Q8IV76 773 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 NPAS3Q8IXF0 933 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 KCTD13Q8WZ19 329 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 GCNAQ96QF7 691 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 LHX5Q9H2C1 402 aa22.87■■□□□ 1.25
SNX1-206ENST00000559389 ZNF638Q14966 1978 aaKnown RBP22.87■■□□□ 1.25
SNX1-206ENST00000559389 MMEP08473 750 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 CCDC172P0C7W6 258 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 GJA1P17302 382 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 YWHAQP27348 245 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 KIF11P52732 1056 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 CDR2Q01850 454 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 ASIC2Q16515 512 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 PMF1Q6P1K2 205 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 IRF2BP2Q7Z5L9 587 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNX1-206ENST00000559389 ZNF397Q8NF99 534 aaPredicted RBP22.86■■□□□ 1.25
SNX1-206ENST00000559389 ING5Q8WYH8 240 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 NUCKS1Q9H1E3 243 aaKnown RBP22.86■■□□□ 1.25
SNX1-206ENST00000559389 FBXO44Q9H4M3 255 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 LUC7L2Q9Y383 392 aaKnown RBP22.86■■□□□ 1.25
SNX1-206ENST00000559389 USP3Q9Y6I4 520 aa22.86■■□□□ 1.25
SNX1-206ENST00000559389 DENND4CQ5VZ89 1909 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CASP14P31944 242 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CDH5P33151 784 aaPredicted RBP22.85■■□□□ 1.25
SNX1-206ENST00000559389 PRKCIP41743 596 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 FMO1Q01740 532 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 ADIGQ0VDE8 80 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 TAF10Q12962 218 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 TEAD2Q15562 447 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 C1orf131Q8NDD1 294 aaKnown RBP22.85■■□□□ 1.25
SNX1-206ENST00000559389 STK32AQ8WU08 396 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CPLX3Q8WVH0 158 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 OVCA2Q8WZ82 227 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 SYN2Q92777 582 aaPredicted RBP22.85■■□□□ 1.25
SNX1-206ENST00000559389 FGF13Q92913 245 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 FBXO32Q969P5 355 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 HSFY1Q96LI6 401 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 SLITRK1Q96PX8 696 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 LRRC4Q9HBW1 653 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CYTH4Q9UIA0 394 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CDH7Q9ULB5 785 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 SCML2Q9UQR0 700 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 USTQ9Y2C2 406 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 CEP83Q9Y592 693 aa22.85■■□□□ 1.25
SNX1-206ENST00000559389 GABBR2O75899 941 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 LSM8O95777 96 aaKnown RBP22.84■■□□□ 1.25
SNX1-206ENST00000559389 BMP1P13497 986 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 CHRNB2P17787 502 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 RPL34P49207 117 aaKnown RBP22.84■■□□□ 1.25
SNX1-206ENST00000559389 RGS7P49802 495 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 TKTL1P51854 596 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 CYP4F8P98187 520 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 TBX2Q13207 712 aaPredicted RBP22.84■■□□□ 1.25
SNX1-206ENST00000559389 PDCLQ13371 301 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 OTOP3Q7RTS5 596 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 CCDC186Q7Z3E2 898 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 WDTC1Q8N5D0 677 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 TDRD5Q8NAT2 981 aaKnown RBP22.84■■□□□ 1.25
SNX1-206ENST00000559389 PDZD8Q8NEN9 1154 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 OLIG1Q8TAK6 271 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 MYADMQ96S97 322 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 SYT11Q9BT88 431 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 PDCL3Q9H2J4 239 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 ATXN3LQ9H3M9 355 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.84■■□□□ 1.25
SNX1-206ENST00000559389 GMIPQ9P107 970 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 PRKAG3Q9UGI9 489 aa22.84■■□□□ 1.25
SNX1-206ENST00000559389 PPP3CCP48454 512 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 ARID5BQ14865 1188 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 TRIM72Q6ZMU5 477 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms