RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
TPM1-215ENST00000558868 MYBPHLA2RUH7 354 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 I3L4J1 428 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 PIK3R2O00459 728 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 HSF2BPO75031 334 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 TJP3O95049 919 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 ALDH2P05091 517 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CLTBP09497 229 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 RARAP10276 462 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 IGFBP6P24592 240 aaPredicted RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 GBP1P32455 592 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CCL23P55773 120 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 DR1Q01658 176 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 GUCY2DQ02846 1103 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 SLC25A11Q02978 314 aaKnown RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 IKBKEQ14164 716 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 PAN2Q504Q3 1202 aaKnown RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 KIAA0319Q5VV43 1072 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CNKSR3Q6P9H4 555 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 C4orf50Q6ZRC1 276 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CLEC20AQ6ZU45 233 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 PAQR9Q6ZVX9 377 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 ADAT2Q7Z6V5 191 aaKnown RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 DCP1BQ8IZD4 617 aaKnown RBP14.45□□□□□ -0.1
TPM1-215ENST00000558868 PRELID2Q8N945 189 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 HASPINQ8TF76 798 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 HDAC7Q8WUI4 952 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 SCLYQ96I15 445 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CASD1Q96PB1 797 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 SLITRK1Q96PX8 696 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 PPP1R12CQ9BZL4 782 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 LRRC19Q9H756 370 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 EPB41L5Q9HCM4 733 aa14.45□□□□□ -0.1
TPM1-215ENST00000558868 CLDN5O00501 218 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 PRPSAP2O60256 369 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 OAZ2O95190 189 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 TRUB2O95900 331 aaKnown RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 RALAP11233 206 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 MIPP30301 263 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 CYP2C18P33260 490 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 FLT3P36888 993 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 COILP38432 576 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 EPHB4P54760 987 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 MAP3K7CLP57077 242 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 CCDC14Q49A88 953 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 BOLA3Q53S33 107 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 BEND6Q5SZJ8 279 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 SYDE1Q6ZW31 735 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 HDXQ7Z353 690 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 GRK7Q8WTQ7 553 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 MYLPFQ96A32 169 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 TBCBQ99426 244 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 RTP3Q9BQQ7 232 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 DDX23Q9BUQ8 820 aaKnown RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 OXCT2Q9BYC2 517 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 FRMD8P1Q9BZ68 369 aaPredicted RBP14.44□□□□□ -0.1
TPM1-215ENST00000558868 NRDE2Q9H7Z3 1164 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 ZWILCHQ9H900 591 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 CSNK1G1Q9HCP0 422 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 PNPLA8Q9NP80 782 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 CNGB3Q9NQW8 809 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 FAM114A2Q9NRY5 505 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-215ENST00000558868 AMACRQ9UHK6 382 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 USP18Q9UMW8 372 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 FAN1Q9Y2M0 1017 aa14.44□□□□□ -0.1
TPM1-215ENST00000558868 TRIOBPQ9H2D6 2365 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 LRRD1A4D1F6 860 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 EFCAB14O75071 495 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 DAB1O75553 588 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 GRAP2O75791 330 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 ZMYND10O75800 440 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 GABBR2O75899 941 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 MRPS5P82675 430 aaKnown RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 LMNB2Q03252 620 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 ADIGQ0VDE8 80 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 NNTQ13423 1086 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 SIX1Q15475 284 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 CCNG2Q16589 344 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 NFE2Q16621 373 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 EMBQ6PCB8 327 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 CCDC137Q6PK04 289 aaKnown RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 SPATA2LQ8IUW3 424 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 MAP7D3Q8IWC1 876 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 CCDC105Q8IYK2 499 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 LRRC43Q8N309 656 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 KCTD6Q8NC69 237 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 CMASQ8NFW8 434 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 TEKT4Q8WW24 435 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
TPM1-215ENST00000558868 SLCO2A1Q92959 643 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 SMOQ99835 787 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms