RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 VITQ6UXI7 678 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 RSPRY1Q96DX4 576 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 CYP2S1Q96SQ9 504 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 FUCA2Q9BTY2 467 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 HESX1Q9UBX0 185 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 AJAP1Q9UKB5 411 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 CA14Q9ULX7 337 aa16.76■□□□□ 0.27
RABGGTA-206ENST00000558649 TICRRQ7Z2Z1 1910 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 TRAV19A0A0A6YYK7 116 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 PAEPP09466 180 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 COPB1P53618 953 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 SLC8A3P57103 927 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 TMEM31Q5JXX7 168 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 MON1AQ86VX9 555 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 TTC30AQ86WT1 665 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 ARL14EPQ8N8R7 260 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 UBA3Q8TBC4 463 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 TFAP2BQ92481 460 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 SLC22A12Q96S37 553 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 TRPV4Q9HBA0 871 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 GMIPQ9P107 970 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 CHORDC1Q9UHD1 332 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 CCL26Q9Y258 94 aa16.75■□□□□ 0.27
RABGGTA-206ENST00000558649 CUL9Q8IWT3 2517 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ZNF840PA6NDX5 716 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 BECN2A8MW95 431 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 HHLA1C9JL84 531 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 M0QYV0 167 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 CYP26A1O43174 497 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 PSMC3P17980 439 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 GDI1P31150 447 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ZNF132P52740 706 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 BCAT1P54687 386 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 FKBP15Q5T1M5 1219 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 SIX5Q8N196 739 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ANKRD52Q8NB46 1076 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 PDZD8Q8NEN9 1154 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ASIC4Q96FT7 647 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 FAM81BQ96LP2 452 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 TRMT61BQ9BVS5 477 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 HSD3B7Q9H2F3 369 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 FBXO44Q9H4M3 255 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 BRD9Q9H8M2 597 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 ZMYM5Q9UJ78 669 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 KIAA1257Q9ULG3 409 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 COL4A3Q01955 1670 aa16.74■□□□□ 0.27
RABGGTA-206ENST00000558649 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 TULP2O00295 520 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 O00370 1275 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PDGFBP01127 241 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 USP17L7P0C7H9 530 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 ZNF18P17022 549 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 KLK7P49862 253 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PDE4CQ08493 712 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 BST2Q10589 180 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PIGZQ86VD9 579 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 MFSD6LQ8IWD5 586 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 DEPDC1BQ8WUY9 529 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 USP13Q92995 863 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PBXIP1Q96AQ6 731 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PCMTD1Q96MG8 357 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 ZSWIM1Q9BR11 485 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 MFSD1Q9H3U5 465 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 PNPLA8Q9NP80 782 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 ACP6Q9NPH0 428 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 LIMA1Q9UHB6 759 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 FHOD1Q9Y613 1164 aa16.73■□□□□ 0.27
RABGGTA-206ENST00000558649 ZNF263O14978 683 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 THAP12O43422 761 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 GPR37L1O60883 481 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 HDCP19113 662 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 RFX1P22670 979 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 GNA15P30679 374 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 PPP3CCP48454 512 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 OVCA2Q8WZ82 227 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 ZFYVE19Q96K21 471 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 LRRC3BQ96PB8 259 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 SLC2A4RGQ9NR83 387 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 COMMD8Q9NX08 183 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 IL37Q9NZH6 218 aa16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
RABGGTA-206ENST00000558649 COL4A2P08572 1712 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms