RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 TSPYL1Q9H0U9 437 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 DPEP3Q9H4B8 488 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 ZWILCHQ9H900 591 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 ZDHHC18Q9NUE0 388 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 KLHL11Q9NVR0 708 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 WHRNQ9P202 907 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 PCDH10Q9P2E7 1040 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 ASIC3Q9UHC3 531 aa17.67■□□□□ 0.42
LDLR-206ENST00000557958 hCG_1818297A0A087WSY0 165 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 C2CD4BA6NLJ0 364 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 AGPSO00116 658 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 FGFR1P11362 822 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 TCF4P15884 667 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 CDKN2BP42772 138 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 RPL21P46778 160 aaKnown RBP17.66■□□□□ 0.42
LDLR-206ENST00000557958 LHX1P48742 406 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 RGS7P49802 495 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 CAV1Q03135 178 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 PDE4CQ08493 712 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 KAZNQ674X7 775 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 OLFML1Q6UWY5 402 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 CCDC89Q8N998 374 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 TTC13Q8NBP0 860 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 BBOF1Q8ND07 529 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 ATG4AQ8WYN0 398 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 SH3GL2Q99962 352 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 FAN1Q9Y2M0 1017 aa17.66■□□□□ 0.42
LDLR-206ENST00000557958 DPYSL4O14531 572 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 POMCP01189 267 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 EN2P19622 333 aaPredicted RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 ITIH2P19823 946 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ADORA2BP29275 332 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 SDC4P31431 198 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 SCNN1GP51170 649 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 DHX9Q08211 1270 aaKnown RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 GPNMBQ14956 572 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ATP13A4Q4VNC1 1196 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 UBLCP1Q8WVY7 318 aaPredicted RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 SEPT8Q92599 483 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 SNF8Q96H20 258 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 MIOSQ9NXC5 875 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 GRHL1Q9NZI5 618 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 CACNG4Q9UBN1 327 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 USP18Q9UMW8 372 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 NDC80O14777 642 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 PRPSAP2O60256 369 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 CLTBP09497 229 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 CCDC130P13994 396 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ATF2P15336 505 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 LMO2P25791 158 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 MIPP30301 263 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 HSD17B3P37058 310 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 SLMAPQ14BN4 828 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 SLC24A5Q71RS6 500 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ARCQ7LC44 396 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 GSTA5Q7RTV2 222 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 KCTD6Q8NC69 237 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 GSTCDQ8NEC7 633 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 RXFP2Q8WXD0 754 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 RAPGEF5Q92565 580 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 HNRNPABQ99729 332 aaKnown RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
LDLR-206ENST00000557958 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 R3HDM2Q9Y2K5 976 aaKnown RBP17.65■□□□□ 0.42
LDLR-206ENST00000557958 BYSLQ13895 437 aaKnown RBP17.64■□□□□ 0.41
LDLR-206ENST00000557958 PLEKHG4Q58EX7 1191 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 C1orf53Q5VUE5 145 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 DSTYKQ6XUX3 929 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 SPATA18Q8TC71 538 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 FBXO25Q8TCJ0 367 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 SLC2A14Q8TDB8 520 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 ART4Q93070 314 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 SENP8Q96LD8 212 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 CALCOCO1Q9P1Z2 691 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 PLAAQ9Y263 795 aa17.64■□□□□ 0.41
LDLR-206ENST00000557958 ARHGEF37A1IGU5 675 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 GOLGA6CA6NDK9 693 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 GABRDO14764 452 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 XPO1O14980 1071 aaKnown RBP17.63■□□□□ 0.41
LDLR-206ENST00000557958 LIASO43766 372 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 TRUB2O95900 331 aaKnown RBP17.63■□□□□ 0.41
LDLR-206ENST00000557958 GOLGA6DP0CG33 693 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 KRT10P13645 584 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 KDELR1P24390 212 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 RPL34P49207 117 aaKnown RBP17.63■□□□□ 0.41
LDLR-206ENST00000557958 GRIK3Q13003 919 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 SMTNL2Q2TAL5 461 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 WSCD1Q658N2 575 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 TXNRD3NBQ6F5E7 133 aa17.63■□□□□ 0.41
LDLR-206ENST00000557958 SLC26A9Q7LBE3 791 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms