RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
PNN-203ENST00000554117 NR3C1P04150 777 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 ARSAP15289 507 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 PFKFB1P16118 471 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 CASP1P29466 404 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 HOXD13P35453 343 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 GALK1P51570 392 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 EHHADHQ08426 723 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 BECN1Q14457 450 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 AASDHQ4L235 1098 aaPredicted RBP11.42□□□□□ -0.58
PNN-203ENST00000554117 IL31Q6EBC2 164 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 SCARA5Q6ZMJ2 495 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 INTS8Q75QN2 995 aaKnown RBP11.42□□□□□ -0.58
PNN-203ENST00000554117 SLC9A9Q8IVB4 645 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 RPLP0P6Q8NHW5 317 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 NETO1Q8TDF5 533 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 PAGE5Q96GU1 130 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 LOXL4Q96JB6 756 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 MRPL45Q9BRJ2 306 aaKnown RBP11.42□□□□□ -0.58
PNN-203ENST00000554117 TTLL2Q9BWV7 592 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 VRTNQ9H8Y1 702 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 WNT6Q9Y6F9 365 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 ZNF292O60281 2723 aa11.42□□□□□ -0.58
PNN-203ENST00000554117 LEFTY2O00292 366 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 IKBKBO14920 756 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 STX10O60499 249 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TADA3O75528 432 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 APBB3O95704 486 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 EGFP01133 1207 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 APODP05090 189 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TDGF1P13385 188 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 SLC8A3P57103 927 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 SLC7A9P82251 487 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TAF10Q12962 218 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 CSRP2Q16527 193 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 EML3Q32P44 896 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 HECTD3Q5T447 861 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 FSTL4Q6MZW2 842 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 SYT13Q7L8C5 426 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 LIMS2Q7Z4I7 341 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TADA2BQ86TJ2 420 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 UNC93AQ86WB7 457 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TTC39CQ8N584 583 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 TLR8Q9NR97 1041 aaKnown RBP11.41□□□□□ -0.58
PNN-203ENST00000554117 SEMA4GQ9NTN9 838 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 LSM7Q9UK45 103 aaKnown RBP11.41□□□□□ -0.58
PNN-203ENST00000554117 CPQQ9Y646 472 aa11.41□□□□□ -0.58
PNN-203ENST00000554117 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 ZNF840PA6NDX5 716 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 LRRIQ3A6PVS8 624 aaPredicted RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 K7ESF4 209 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 AXIN1O15169 862 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 MAPK13O15264 365 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 HCRTO43612 131 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 AP1G2O75843 785 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 NR2F2P24468 414 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 GBP1P32455 592 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 EIF2DP41214 584 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 VAMP7P51809 220 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 DGKEP52429 567 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 STK4Q13043 487 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 BYSLQ13895 437 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 GAS6Q14393 721 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 USP39Q53GS9 565 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 PRR23CQ6ZRP0 262 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 TRMT11Q7Z4G4 463 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 FAM35AQ86V20 835 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 GRAMD1CQ8IYS0 662 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 FAM160A2Q8N612 972 aaPredicted RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 FAM84AQ96KN4 292 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 SPACA7Q96KW9 195 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 PNKPQ96T60 521 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 TSG101Q99816 390 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 GTPBP4Q9BZE4 634 aaKnown RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 ZNF518BQ9C0D4 1074 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 POLMQ9NP87 494 aaPredicted RBP11.4□□□□□ -0.58
PNN-203ENST00000554117 KRT82Q9NSB4 513 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 GCNT4Q9P109 453 aa11.4□□□□□ -0.58
PNN-203ENST00000554117 OTOGLQ3ZCN5 2332 aa11.4□□□□□ -0.59
PNN-203ENST00000554117 FRYLO94915 3013 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.39□□□□□ -0.59
PNN-203ENST00000554117 E2F8A0AVK6 867 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 FAM200BP0CF97 657 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 EPB41P11171 864 aaKnown RBP11.39□□□□□ -0.59
PNN-203ENST00000554117 KCNA4P22459 653 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
PNN-203ENST00000554117 CASP4P49662 377 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 TUBP50607 506 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 CDH8P55286 799 aa11.39□□□□□ -0.59
PNN-203ENST00000554117 MRPS21P82921 87 aaKnown RBP11.39□□□□□ -0.59
PNN-203ENST00000554117 GAD2Q05329 585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms