RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CTAGE5O15320 804 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 NARSO43776 548 aaKnown RBP5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MFAP3LO75121 409 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 ZNF202O95125 648 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 CFBP00751 764 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 LPLP06858 475 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 SNHG28P0DPA3 235 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MASP1P48740 699 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MAN2A2P49641 1150 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 RABGGTBP53611 331 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 NRG3P56975 720 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 IRX3P78415 501 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-214ENST00000550893 KLF10Q13118 480 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 FAM214AQ32MH5 1076 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 CT83Q5H943 113 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 TTC22Q5TAA0 569 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MSL3Q8N5Y2 521 aaKnown RBP5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MB21D1Q8N884 522 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 GMCL1P1Q8NEA9 526 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 RSAD2Q8WXG1 361 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 EVI5LQ96CN4 794 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 CCDC17Q96LX7 622 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 SPATC1LQ9H0A9 340 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 CAAP1Q9H8G2 361 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 TRIP12Q14669 1992 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-214ENST00000550893 F5H6K3 240 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 MPHOSPH10O00566 681 aaKnown RBP5.71□□□□□ -1.5
SCAF11-214ENST00000550893 NRP1O14786 923 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-214ENST00000550893 ULK1O75385 1050 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 SGPL1O95470 568 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 CYP2B6P20813 491 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 ADORA2AP29274 412 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 CYP2C19P33261 490 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 SOX5P35711 763 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 CASRP41180 1078 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 USP14P54578 494 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 SESN3P58005 492 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 HAND2P61296 217 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 KLRC3Q07444 240 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 TUBA3CQ13748 450 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 TMEM63BQ5T3F8 832 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 C1QL3Q5VWW1 255 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 TUBA3EQ6PEY2 450 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 GLB1L2Q8IW92 636 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 GPRC5AQ8NFJ5 357 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 MDGA1Q8NFP4 955 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 OR5M3Q8NGP4 307 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 OR14C36Q8NHC7 312 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 ATXN2LQ8WWM7 1075 aaKnown RBP5.71□□□□□ -1.5
SCAF11-214ENST00000550893 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 LPAR1Q92633 364 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 MNTQ99583 582 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 PCED1AQ9H1Q7 454 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 KCTD10Q9H3F6 313 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 CPVLQ9H3G5 476 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 SLC38A10Q9HBR0 1119 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 HELLSQ9NRZ9 838 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 PARPBPQ9NWS1 579 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 TMOD4Q9NZQ9 345 aa5.71□□□□□ -1.5
SCAF11-214ENST00000550893 ING1Q9UK53 422 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-214ENST00000550893 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 SLC15A5A6NIM6 579 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 H0YGN5 161 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 ATP2A1O14983 1001 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 ERC2O15083 957 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 FLOT1O75955 427 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 IPO13O94829 963 aaKnown RBP5.7□□□□□ -1.5
SCAF11-214ENST00000550893 SNAI1O95863 264 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-214ENST00000550893 PGK2P07205 417 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 CHMLP26374 656 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 MAPK4P31152 587 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 LGALS4P56470 323 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 SNAP25P60880 206 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 COG2Q14746 738 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 MUM1L1Q5H9M0 696 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 CCSAPQ6IQ19 270 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-214ENST00000550893 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 HTR3DQ70Z44 454 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 CYB5R4Q7L1T6 521 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 APBB1IPQ7Z5R6 666 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-214ENST00000550893 RAET1EQ8TD07 263 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 CHAC2Q8WUX2 184 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 STAG1Q8WVM7 1258 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 SOCS4Q8WXH5 440 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 APOBEC2Q9Y235 224 aaKnown RBP5.7□□□□□ -1.5
SCAF11-214ENST00000550893 CDY2AQ9Y6F7 541 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 RPTORQ8N122 1335 aa5.7□□□□□ -1.5
SCAF11-214ENST00000550893 COL4A4P53420 1690 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 COL4A6Q14031 1691 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 CYP21A2P08686 494 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 PDHBP11177 359 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 GNAT2P19087 354 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms