RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 ATP1A4Q13733 1029 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 TRIM71Q2Q1W2 868 aaKnown RBP7.41□□□□□ -1.22
LEMD3-206ENST00000545026 GATAD2AQ86YP4 633 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 C1orf210Q8IVY1 113 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 SUGP1Q8IWZ8 645 aaKnown RBP7.41□□□□□ -1.22
LEMD3-206ENST00000545026 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 GALNT15Q8N3T1 639 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 OR1N1Q8NGS0 311 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 SLC30A5Q8TAD4 765 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 ATG4AQ8WYN0 398 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 TRIM63Q969Q1 353 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 GCC1Q96CN9 775 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 ZBTB45Q96K62 511 aaPredicted RBP7.41□□□□□ -1.22
LEMD3-206ENST00000545026 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 HS3ST4Q9Y661 456 aa7.41□□□□□ -1.22
LEMD3-206ENST00000545026 PPM1DO15297 605 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 CCNT2O60583 730 aaKnown RBP7.4□□□□□ -1.22
LEMD3-206ENST00000545026 PPP3CBP16298 524 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 LAG3P18627 525 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 NTSR1P30989 418 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 PRKAR1BP31321 381 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 GATMP50440 423 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 PGDP52209 483 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 ARL4CP56559 192 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 SCAPQ12770 1279 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 GPS1Q13098 491 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 CDSNQ15517 529 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 USP39Q53GS9 565 aaKnown RBP7.4□□□□□ -1.22
LEMD3-206ENST00000545026 DEPDC1Q5TB30 811 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 SULT6B1Q6IMI4 303 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 PALM2Q8IXS6 379 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 OTUD7AQ8TE49 926 aaPredicted RBP7.4□□□□□ -1.22
LEMD3-206ENST00000545026 ACTRT3Q9BYD9 372 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 TPSD1Q9BZJ3 242 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 HELLSQ9NRZ9 838 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 RAPGEFL1Q9UHV5 662 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 GTF2A1LQ9UNN4 478 aa7.4□□□□□ -1.22
LEMD3-206ENST00000545026 ZAR1LA6NP61 321 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 DHHO43323 396 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 USP1O94782 785 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 ERBB2P04626 1255 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 ITGA2BP08514 1039 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 PDHA1P08559 390 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 SRGAP2BP0DMP2 458 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 SRGNP10124 158 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 PNLIPRP1P54315 467 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 TAF5Q15542 800 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 RASGRP3Q8IV61 690 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 ANKRD18AQ8IVF6 992 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 MBD3L2Q8NHZ7 208 aaPredicted RBP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 SLC25A43Q8WUT9 341 aaPredicted RBP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 OSCP1Q8WVF1 389 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 LPIN2Q92539 896 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 DVL3Q92997 716 aaPredicted RBP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 HIST1H2AAQ96QV6 131 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 C17orf80Q9BSJ5 609 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 TP63Q9H3D4 680 aaPredicted RBP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 MLXIPQ9HAP2 919 aa7.39□□□□□ -1.23
LEMD3-206ENST00000545026 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 HERC5Q9UII4 1024 aaKnown RBP7.39□□□□□ -1.23
LEMD3-206ENST00000545026 UNC119BA6NIH7 251 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 BTBD11A6QL63 1104 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 LPXNO60711 386 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 VIPP01282 170 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 GYS1P13807 737 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 ATXN1P54253 815 aaKnown RBP7.38□□□□□ -1.23
LEMD3-206ENST00000545026 POLE2P56282 527 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 POU5F1BQ06416 359 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 TP53BP2Q13625 1128 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 TIGD6Q17RP2 521 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 LY6KQ17RY6 165 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 SPDYAQ5MJ70 313 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 GPR149Q86SP6 731 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 DTX2Q86UW9 622 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 ATRIPQ8WXE1 791 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 CDK5RAP1Q96SZ6 601 aaKnown RBP7.38□□□□□ -1.23
LEMD3-206ENST00000545026 EPS8L2Q9H6S3 715 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 GOLGA2P5Q9HBQ8 144 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 CASS4Q9NQ75 786 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 LPAR3Q9UBY5 353 aa7.38□□□□□ -1.23
LEMD3-206ENST00000545026 COL15A1P39059 1388 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 FCHO1O14526 889 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 DNPH1O43598 174 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 LMNAP02545 664 aaKnown RBP7.37□□□□□ -1.23
LEMD3-206ENST00000545026 ANXA6P08133 673 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 EPHA3P29320 983 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 HTR7P34969 479 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 GUCY1B3Q02153 619 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 FZD5Q13467 585 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 SLC9A4Q6AI14 798 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 CYP26C1Q6V0L0 522 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 RFX8Q6ZV50 586 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 ABHD5Q8WTS1 349 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 GRAMD1AQ96CP6 724 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 PTCD3Q96EY7 689 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms