RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 TNIP3Q96KP6 325 aa27.11■■□□□ 1.93
COL13A1-214ENST00000522165 SLC38A7Q9NVC3 462 aa27.11■■□□□ 1.93
COL13A1-214ENST00000522165 BCCIPQ9P287 314 aaKnown RBP eCLIP27.11■■□□□ 1.93
COL13A1-214ENST00000522165 ENDOD1O94919 500 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 PRKAR2AP13861 404 aaKnown RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 CDO1Q16878 200 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 P3H1Q32P28 736 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 CCSAPQ6IQ19 270 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 ACTL9Q8TC94 416 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 SLC2A14Q8TDB8 520 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 CDC42EP4Q9H3Q1 356 aaKnown RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 CYLDQ9NQC7 956 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 CENPFP49454 3210 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 GRIN2DO15399 1336 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 GPR182O15218 404 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 PRPSAP2O60256 369 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 MLH1P40692 756 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 IRAK1P51617 712 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 OTUD4Q01804 1114 aaKnown RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 HIBCHQ6NVY1 386 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 GAD1Q99259 594 aa27.1■■□□□ 1.93
COL13A1-214ENST00000522165 TSPYL2Q9H2G4 693 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 AGO3Q9H9G7 860 aaKnown RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 SAE1Q9UBE0 346 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-214ENST00000522165 A6NNZ2 444 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 CYB561D2O14569 222 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 MYCNP04198 464 aaPredicted RBP27.09■■□□□ 1.93
COL13A1-214ENST00000522165 FAM163BP0C2L3 166 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ZSCAN5DPP0CG00 497 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ELNP15502 786 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 SDC4P31431 198 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ARSEP51690 589 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ATP11AP98196 1134 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 PLCB3Q01970 1234 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 TUBB8Q3ZCM7 444 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 RFX6Q8HWS3 928 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 TMEM121Q9BTD3 319 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 TMEM109Q9BVC6 243 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ADAM7Q9H2U9 754 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 RSAD1Q9HA92 442 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.09■■□□□ 1.93
COL13A1-214ENST00000522165 NOVA2Q9UNW9 492 aaKnown RBP27.09■■□□□ 1.93
COL13A1-214ENST00000522165 ETS1P14921 441 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 CST5P28325 142 aaPredicted RBP27.09■■□□□ 1.93
COL13A1-214ENST00000522165 THPOP40225 353 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 GNGT1P63211 74 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 LRRC31Q6UY01 552 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 B3GALNT2Q8NCR0 500 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 CALN1Q9BXU9 219 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 RNF186Q9NXI6 227 aa27.09■■□□□ 1.93
COL13A1-214ENST00000522165 CAND2O75155 1236 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 IGFBP6P24592 240 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-214ENST00000522165 TKTP29401 623 aaKnown RBP27.08■■□□□ 1.93
COL13A1-214ENST00000522165 SCNN1AP37088 669 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 CDH6P55285 790 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 NOGQ13253 232 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 PTGISQ16647 500 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 FAM172AQ8WUF8 416 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 LPPQ93052 612 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 OSBPL7Q9BZF2 842 aa27.08■■□□□ 1.93
COL13A1-214ENST00000522165 DNALI1O14645 258 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 AOC2O75106 756 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 THP07101 528 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 HPDP32754 393 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 ACADSBP45954 432 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 AFF1P51825 1210 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 SP3Q02447 781 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 WSCD1Q658N2 575 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 SLC26A9Q7LBE3 791 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 UHMK1Q8TAS1 419 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 CLEC4CQ8WTT0 213 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 TLCD1Q96CP7 247 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 HSFY1Q96LI6 401 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 HNRNPABQ99729 332 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 DDX23Q9BUQ8 820 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 PCDH9Q9HC56 1237 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 MIOSQ9NXC5 875 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 DNAH12Q6ZR08 3092 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 APOC4-APOC2K7ER74 178 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 SGK1O00141 431 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 APOC2P02655 101 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 BOLA3Q53S33 107 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 TTC19Q6DKK2 380 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 MRPL10Q7Z7H8 261 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 CROCCP2Q86T23 111 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 ARFGAP2Q8N6H7 521 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 PGM2Q96G03 612 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 PWWP2AQ96N64 755 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 FOXP3Q9BZS1 431 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 NGRNQ9NPE2 291 aaKnown RBP27.07■■□□□ 1.92
COL13A1-214ENST00000522165 CACNG4Q9UBN1 327 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 GIT1Q9Y2X7 761 aa27.07■■□□□ 1.92
COL13A1-214ENST00000522165 ARL5CA6NH57 179 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 GABRDO14764 452 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 CAPN15O75808 1086 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 GPS1Q13098 491 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 MMRN1Q13201 1228 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 DPYSL3Q14195 570 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 ZSCAN26Q16670 478 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 AGMOQ6ZNB7 445 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms