RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 TTC30AQ86WT1 665 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 NPAS3Q8IXF0 933 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 NXPE3Q969Y0 559 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 TCEAL4Q96EI5 215 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 MYADMQ96S97 322 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 UHRF1Q96T88 793 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-214ENST00000498107 SLITRK6Q9H5Y7 841 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 IL21Q9HBE4 155 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 IL37Q9NZH6 218 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
SSBP1-214ENST00000498107 DOCK8Q8NF50 2099 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PATJQ8NI35 1801 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 EPHB6O15197 1021 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 CEBPBP17676 345 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PFKLP17858 780 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 SP100P23497 879 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-214ENST00000498107 CLCN1P35523 988 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PDE4CQ08493 712 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 IFRD2Q12894 506 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-214ENST00000498107 TEAD2Q15562 447 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PKDCCQ504Y2 493 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 FIGNQ5HY92 759 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 MTSS1LQ765P7 747 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PIGZQ86VD9 579 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF677Q86XU0 584 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 GJD3Q8N144 294 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 UBA3Q8TBC4 463 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 ING5Q8WYH8 240 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 HSFY1Q96LI6 401 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 TASP1Q9H6P5 420 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 LRRC4Q9HBW1 653 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF638Q14966 1978 aaKnown RBP16.87■□□□□ 0.29
SSBP1-214ENST00000498107 NCANO14594 1321 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 NCOR1O75376 2440 aa16.87■□□□□ 0.29
SSBP1-214ENST00000498107 FAM92AA1XBS5 289 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 HHLA1C9JL84 531 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 MOSPD3O75425 235 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 CYP11B1P15538 503 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 KIF11P52732 1056 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SNX16P57768 344 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 USP46P62068 366 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 TAF10Q12962 218 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 GPR158Q5T848 1215 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SLC47A2Q86VL8 602 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SLC35F5Q8WV83 523 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 KCTD13Q8WZ19 329 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SECISBP2LQ93073 1101 aaKnown RBP16.86■□□□□ 0.29
SSBP1-214ENST00000498107 E2F7Q96AV8 911 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 MCRS1Q96EZ8 462 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 NOX5Q96PH1 765 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 COL25A1Q9BXS0 654 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-214ENST00000498107 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
SSBP1-214ENST00000498107 IGSF9Q9P2J2 1179 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 SCML2Q9UQR0 700 aa16.86■□□□□ 0.29
SSBP1-214ENST00000498107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSBP1-214ENST00000498107 GFPT2O94808 682 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SSBP1-214ENST00000498107 FERP16591 822 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 GJA1P17302 382 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 WEE1P30291 646 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 PBX1P40424 430 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 ACADSBP45954 432 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 PSEN1P49768 467 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 RAB41Q5JT25 222 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 SARM1Q6SZW1 724 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 CCDC186Q7Z3E2 898 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 TMEM150AQ86TG1 271 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 MON1AQ86VX9 555 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 SIX6OS1Q8N1H7 587 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 ARHGAP18Q8N392 663 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 STK32AQ8WU08 396 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 RBSNQ9H1K0 784 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 LHX5Q9H2C1 402 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 ACP6Q9NPH0 428 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 CYLDQ9NQC7 956 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 TLR8Q9NR97 1041 aaKnown RBP16.85■□□□□ 0.29
SSBP1-214ENST00000498107 USP3Q9Y6I4 520 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 ITIH6Q6UXX5 1313 aa16.85■□□□□ 0.29
SSBP1-214ENST00000498107 DENND4CQ5VZ89 1909 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 VCANP13611 3396 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 A0A1W2PQJ5 194 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 CALCAP01258 141 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 AVPR1AP37288 418 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 GPD2P43304 727 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 TKTL1P51854 596 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 CYP4F8P98187 520 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 ZSCAN18Q8TBC5 510 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-214ENST00000498107 SMARCD2Q92925 531 aa16.84■□□□□ 0.29
SSBP1-214ENST00000498107 LIMD1Q9UGP4 676 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms