RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CUL9Q8IWT3 2517 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF638Q14966 1978 aaKnown RBP11.7□□□□□ -0.54
CPSF7-212ENST00000489728 HHLA1C9JL84 531 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 GOLGA6L19H0YKK7 550 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 DLL1O00548 723 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 BEST1O76090 585 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SRFP11831 508 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 TCF3P15923 654 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FCARP24071 287 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 PLA2G4AP47712 749 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 PSEN1P49768 467 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 USP46P62068 366 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 PKDCCQ504Y2 493 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FAM78AQ5JUQ0 283 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 PARM1Q6UWI2 310 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 CCDC186Q7Z3E2 898 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 TTC30AQ86WT1 665 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FMNL3Q8IVF7 1028 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 CMTM8Q8IZV2 173 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SCML4Q8N228 414 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 KCTD13Q8WZ19 329 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 EDAQ92838 391 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FGF14Q92915 247 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
CPSF7-212ENST00000489728 STK33Q9BYT3 514 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 MUTYHQ9UIF7 546 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SCML2Q9UQR0 700 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 SIK3Q9Y2K2 1263 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 USP3Q9Y6I4 520 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 NUMBLQ9Y6R0 609 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 MYH10P35580 1976 aa11.7□□□□□ -0.54
CPSF7-212ENST00000489728 ANAPC1Q9H1A4 1944 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 A0A1W2PQC6 194 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF840PA6NDX5 716 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 F8VZ95 297 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-212ENST00000489728 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-212ENST00000489728 OLFM2O95897 454 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ASGR2P07307 311 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 USP17L7P0C7H9 530 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 GJA1P17302 382 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 GNA15P30679 374 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 AVPR1AP37288 418 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 KIF11P52732 1056 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF445P59923 1031 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZXDAP98168 799 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 CYP4F8P98187 520 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 PFKPQ01813 784 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 UBXN1Q04323 297 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 PTK2Q05397 1052 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TAF10Q12962 218 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 GJB7Q6PEY0 223 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ARHGAP18Q8N392 663 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF276Q8N554 614 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 CELF5Q8N6W0 485 aaKnown RBP11.69□□□□□ -0.54
CPSF7-212ENST00000489728 STK32AQ8WU08 396 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TFAP2BQ92481 460 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 GANQ9H2C0 597 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TRPV5Q9NQA5 729 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
CPSF7-212ENST00000489728 CYLDQ9NQC7 956 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 TLR8Q9NR97 1041 aaKnown RBP11.69□□□□□ -0.54
CPSF7-212ENST00000489728 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
CPSF7-212ENST00000489728 KIF26AQ9ULI4 1882 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 OAS1P00973 400 aaKnown RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 PSMC3P17980 439 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 PDE4CQ08493 712 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 SIGLEC14Q08ET2 396 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 FCHO2Q0JRZ9 810 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 RAPGEF1Q13905 1077 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 DRAP1Q14919 205 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 SYCP1Q15431 976 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 STXBP5Q5T5C0 1151 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 KLHDC10Q6PID8 442 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 POTEHQ6S545 545 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 TADA2BQ86TJ2 420 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 PIGZQ86VD9 579 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 DDX42Q86XP3 938 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 MFSD6LQ8IWD5 586 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 NEK11Q8NG66 645 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms