RNA–Protein interactions for RNA: ENST00000477726.1

SIGMAR1-205, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best) BASIC

Gene SIGMAR1, Length 840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-205ENST00000477726 ST13P5Q8NFI4 369 aaPredicted RBP28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 TRMT61BQ9BVS5 477 aaKnown RBP28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 VPS16Q9H269 839 aa28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 IL37Q9NZH6 218 aa28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 NCANO14594 1321 aa28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 DENND4CQ5VZ89 1909 aa28.86■■■□□ 2.21
SIGMAR1-205ENST00000477726 TMEM221A6NGB7 291 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 HEPACAM2A8MVW5 462 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 M0R296 226 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 TADA3O75528 432 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 USP17L7P0C7H9 530 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 RFX1P22670 979 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 GOLGA7BQ2TAP0 167 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 WNT16Q9UBV4 365 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 LIMA1Q9UHB6 759 aaKnown RBP28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 TSPAN16Q9UKR8 245 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 CNTN6Q9UQ52 1028 aa28.85■■■□□ 2.21
SIGMAR1-205ENST00000477726 ZNF840PA6NDX5 716 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 NARSO43776 548 aaKnown RBP28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 ABL1P00519 1130 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 VIPR2P41587 438 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 TPM4P67936 248 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 BST2Q10589 180 aaKnown RBP28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 NCAPHQ15003 741 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 ARHGAP44Q17R89 818 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 SCAMP5Q8TAC9 235 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 FUCA2Q9BTY2 467 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 TDP1Q9NUW8 608 aa28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 THG1LQ9NWX6 298 aaKnown RBP28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 NUP210Q8TEM1 1887 aaPredicted RBP28.84■■■□□ 2.21
SIGMAR1-205ENST00000477726 ZNF638Q14966 1978 aaKnown RBP28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 FAM92AA1XBS5 289 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 PRR33A8MZF0 331 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 MED7O43513 233 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 CKMP06732 381 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 HDCP19113 662 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 ZNF132P52740 706 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 COPB1P53618 953 aaKnown RBP28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 ZNF268Q14587 947 aaPredicted RBP28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 CNGA2Q16280 664 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 LCLAT1Q6UWP7 414 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 VITQ6UXI7 678 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 IRF7Q92985 503 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 SMOC2Q9H3U7 446 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 BRD9Q9H8M2 597 aa28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 TLR8Q9NR97 1041 aaKnown RBP28.83■■■□□ 2.21
SIGMAR1-205ENST00000477726 O00370 1275 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 ZNF263O14978 683 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 CFHP08603 1231 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 SETSIPP0DME0 302 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 ZNF18P17022 549 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 GPC5P78333 572 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 BPIFB1Q8TDL5 484 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 PLA2G2FQ9BZM2 168 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 DNAJC12Q9UKB3 198 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 SCML2Q9UQR0 700 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 OBSL1O75147 1896 aa28.82■■■□□ 2.2
SIGMAR1-205ENST00000477726 LRRC10BA6NIK2 292 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 RNF225M0QZC1 329 aaPredicted RBP28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 XPO1O14980 1071 aaKnown RBP28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 USP8P40818 1118 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 ZSCAN23Q3MJ62 389 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 SNX30Q5VWJ9 437 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 GJB7Q6PEY0 223 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 BMP8AQ7Z5Y6 402 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 DNASE1L2Q92874 299 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 DAAM1Q9Y4D1 1078 aa28.81■■■□□ 2.2
SIGMAR1-205ENST00000477726 HHLA1C9JL84 531 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 GDI1P31150 447 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 TUBP50607 506 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 KIF11P52732 1056 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 PLCB2Q00722 1185 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 GRM2Q14416 872 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 ARHGAP29Q52LW3 1261 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 HECTD3Q5T447 861 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 TTC30AQ86WT1 665 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 DHX40Q8IX18 779 aaKnown RBP28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 ARL14EPQ8N8R7 260 aaPredicted RBP28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 SHC3Q92529 594 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 PBXIP1Q96AQ6 731 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 ASIC4Q96FT7 647 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 SHDQ96IW2 340 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 LSM14BQ9BX40 385 aaKnown RBP28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 MFSD1Q9H3U5 465 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 SIX2Q9NPC8 291 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 PLCB1Q9NQ66 1216 aa28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 CHORDC1Q9UHD1 332 aaPredicted RBP28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.8■■■□□ 2.2
SIGMAR1-205ENST00000477726 PATJQ8NI35 1801 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 C2orf78A6NCI8 922 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 FAM86C2PA6NEL3 165 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 CHADO15335 359 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 PRAMEF12O95522 483 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 BRD2P25440 801 aaKnown RBP28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 GNA15P30679 374 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 PSEN1P49768 467 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 PDE4CQ08493 712 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 FCHO2Q0JRZ9 810 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 KCNMA1Q12791 1236 aa28.79■■■□□ 2.2
SIGMAR1-205ENST00000477726 KLHDC7AQ5VTJ3 777 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms