RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GATAD2AQ86YP4 633 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
VPS50-212ENST00000476413 ATG4AQ8WYN0 398 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 FAM136AQ96C01 138 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 ZBTB45Q96K62 511 aaPredicted RBP6.97□□□□□ -1.29
VPS50-212ENST00000476413 PAGR1Q9BTK6 254 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 KLC2Q9H0B6 622 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 TP63Q9H3D4 680 aaPredicted RBP6.97□□□□□ -1.29
VPS50-212ENST00000476413 INTS13Q9NVM9 706 aa6.97□□□□□ -1.29
VPS50-212ENST00000476413 SRP68Q9UHB9 627 aaKnown RBP6.97□□□□□ -1.29
VPS50-212ENST00000476413 CDKL5O76039 1030 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 USP1O94782 785 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 SPDEFO95238 335 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 NDUFA10O95299 355 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 GYS1P13807 737 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 PPP3CBP16298 524 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 HTR7P34969 479 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 BMPR1AP36894 532 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 PDE6CP51160 858 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 GPS1Q13098 491 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 CCNIQ14094 377 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 NFIXQ14938 502 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 CDSNQ15517 529 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 RFX8Q6ZV50 586 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 ZNF668Q96K58 619 aaPredicted RBP6.96□□□□□ -1.3
VPS50-212ENST00000476413 WDR24Q96S15 920 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 FSCN3Q9NQT6 498 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 C9orf78Q9NZ63 289 aaPredicted RBP6.96□□□□□ -1.3
VPS50-212ENST00000476413 PGAP2Q9UHJ9 254 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 CNOT11Q9UKZ1 510 aaKnown RBP6.96□□□□□ -1.3
VPS50-212ENST00000476413 NOX1Q9Y5S8 564 aa6.96□□□□□ -1.3
VPS50-212ENST00000476413 TMEM200CA6NKL6 621 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 MUSKO15146 869 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 PPM1DO15297 605 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 CBFA2T3O75081 653 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 PDHA1P08559 390 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS50-212ENST00000476413 PGDP52209 483 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 FZD5Q13467 585 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 TIGD6Q17RP2 521 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 LY6KQ17RY6 165 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 SPDYE7PQ495Y7 208 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 DEPDC1Q5TB30 811 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 CYP26C1Q6V0L0 522 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 MBD3L2Q8NHZ7 208 aaPredicted RBP6.95□□□□□ -1.3
VPS50-212ENST00000476413 SCAMP5Q8TAC9 235 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 SLC30A5Q8TAD4 765 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 EXTL1Q92935 676 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 MYEOVQ96EZ4 313 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 C8orf49Q96NF6 230 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 MAF1Q9H063 256 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
VPS50-212ENST00000476413 PRDM8Q9NQV8 689 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 TMOD4Q9NZQ9 345 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 HERC5Q9UII4 1024 aaKnown RBP6.95□□□□□ -1.3
VPS50-212ENST00000476413 TESMINQ9Y4I5 508 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 COL15A1P39059 1388 aa6.95□□□□□ -1.3
VPS50-212ENST00000476413 TRGV11A0A075B6L2 103 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 FCHO1O14526 889 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 DNPH1O43598 174 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 FAM155BO75949 473 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 LMNAP02545 664 aaKnown RBP6.94□□□□□ -1.3
VPS50-212ENST00000476413 ANXA6P08133 673 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 ITGA2BP08514 1039 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 KLRK1P26718 216 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 ATXN1P54253 815 aaKnown RBP6.94□□□□□ -1.3
VPS50-212ENST00000476413 ALFQ53S48 1182 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 ARMC6Q6NXE6 501 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 MOGAT3Q86VF5 341 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 RASGRP3Q8IV61 690 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 COLGALT2Q8IYK4 626 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 ZNF276Q8N554 614 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 CXorf38Q8TB03 319 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 LPIN2Q92539 896 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 RILPL2Q969X0 211 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 GPR20Q99678 358 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 C17orf80Q9BSJ5 609 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 DDX23Q9BUQ8 820 aaKnown RBP6.94□□□□□ -1.3
VPS50-212ENST00000476413 ACTRT3Q9BYD9 372 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 EPS8L2Q9H6S3 715 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 RRN3Q9NYV6 651 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS50-212ENST00000476413 RIMKLBQ9ULI2 386 aa6.94□□□□□ -1.3
VPS50-212ENST00000476413 UNC119BA6NIH7 251 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 B9A039 149 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 K7ESM1 405 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 LPXNO60711 386 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 VIPP01282 170 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 GATMP50440 423 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 TP53BP2Q13625 1128 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 GRM4Q14833 912 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 SLC9A4Q6AI14 798 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 GPR149Q86SP6 731 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 ANKRD18AQ8IVF6 992 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 C1orf210Q8IVY1 113 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 PALM2Q8IXS6 379 aa6.93□□□□□ -1.3
VPS50-212ENST00000476413 SUN3Q8TAQ9 357 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms