RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KCNK18Q7Z418 384 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMC3Q7Z5M5 1100 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GPR142Q7Z601 462 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 PLEKHH3Q7Z736 793 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CATSPER3Q86XQ3 398 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SMYD4Q8IYR2 804 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC33Q8N5R6 958 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MSL3Q8N5Y2 521 aaKnown RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 C12orf50Q8NA57 414 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 GALNT6Q8NCL4 622 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 SMG8Q8ND04 991 aaKnown RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RCBTB1Q8NDN9 531 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RASSF8Q8NHQ8 419 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ERMNQ8TAM6 284 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZSCAN18Q8TBC5 510 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 UBASH3BQ8TF42 649 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RAD54LQ92698 747 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 STAMQ92783 540 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CDHR1Q96JP9 859 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CAPNS2Q96L46 248 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 C7orf25Q9BPX7 421 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 LRFN3Q9BTN0 628 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 CENPOQ9BU64 300 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TEKT3Q9BXF9 490 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 NT5C3AQ9H0P0 336 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 BCAS3Q9H6U6 928 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAGEF1Q9HAY2 307 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 TUFT1Q9NNX1 390 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ITM2CQ9NQX7 267 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ACSS2Q9NR19 701 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 ANO10Q9NW15 660 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 RGL1Q9NZL6 768 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 STK17AQ9UEE5 414 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
HMGB1P4-201ENST00000455362 MGAMO43451 1857 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 POM121BA6NF01 834 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MYMKA6NI61 221 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ASB14A6NK59 587 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 E9PMD0 336 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 DDX39AO00148 427 aaKnown RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ARNTLO00327 626 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 DVL2O14641 736 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 FFAR2O15552 330 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CHMP2AO43633 222 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SIGLEC6O43699 453 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 GFPT2O94808 682 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ARHGEF15O94989 841 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 PRAMEF1O95521 474 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CAVIN2O95810 425 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCNE2O96020 404 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 PLA2G4BP0C869 781 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 TGFB3P10600 412 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MYF5P13349 255 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 RPL17P18621 184 aaKnown RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MUTP22033 750 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CASP1P29466 404 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 IL12RB1P42701 662 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ASPAP45381 313 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ARL4CP56559 192 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 PSMC6P62333 389 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SP2Q02086 613 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SOX4Q06945 474 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CRHR2Q13324 411 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CUL4BQ13620 913 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CTTNQ14247 550 aaKnown RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 STX1AQ16623 288 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 CT83Q5H943 113 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SPATA1Q5VX52 437 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZNF385CQ66K41 422 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 HAUS3Q68CZ6 603 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 FDX2Q6P4F2 183 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SEPT14Q6ZU15 432 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 ACAD11Q709F0 780 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MIER3Q7Z3K6 550 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 OSTM1Q86WC4 334 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 LIX1LQ8IVB5 337 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 RDM1Q8NG50 284 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLC30A5Q8TAD4 765 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SMARCE1Q969G3 411 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 DYDC2Q96IM9 177 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 BTBD6Q96KE9 485 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 GSDMAQ96QA5 445 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 NUDT16L1Q9BRJ7 211 aaKnown RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMEM120AQ9BXJ8 343 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 AP1M1Q9BXS5 423 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 BLZF1Q9H2G9 400 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 SUGCTQ9HAC7 445 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 PLEKHA5Q9HAU0 1116 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 VPS45Q9NRW7 570 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNK4Q9NYG8 393 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 PPARGC1AQ9UBK2 798 aaKnown RBP5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAN1B1Q9UKM7 699 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 STXBP5LQ9Y2K9 1186 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 TMEM98Q9Y2Y6 226 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 NFASCO94856 1347 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms