RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PIDD1Q9HB75 910 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 CAPN15O75808 1086 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 ICAM3P32942 547 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
PTCH1-208ENST00000430669 ARSHQ5FYA8 562 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 NOL9Q5SY16 702 aaKnown RBP11.99□□□□□ -0.49
PTCH1-208ENST00000430669 LRRC6Q86X45 466 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 MAGEB18Q96M61 343 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 ARHGEF38Q9NXL2 777 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 TRPV2Q9Y5S1 764 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 MEFVO15553 781 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-208ENST00000430669 TIMM44O43615 452 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 PRUNE1Q86TP1 453 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 FAM172AQ8WUF8 416 aa11.99□□□□□ -0.49
PTCH1-208ENST00000430669 DCDC2CA8MYV0 355 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 LRRC38Q5VT99 294 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SPOCD1Q6ZMY3 1216 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 FAM47EQ6ZV65 393 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 RAB42Q8N4Z0 105 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 RMDN1Q96DB5 314 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 ASIC4Q96FT7 647 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SEPT5Q99719 369 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 MRPL9Q9BYD2 267 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DDIT4Q9NX09 232 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SIGLEC16A6NMB1 481 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 LCA5LO95447 670 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 EFTUD2Q15029 972 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 FASTKD1Q53R41 847 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SETD3Q86TU7 594 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TSPAN16Q9UKR8 245 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TFR2Q9UP52 801 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TMEM120BA0PK00 339 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 IGF2BP3O00425 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TLR2O60603 784 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 KLHL2O95198 593 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 HIBCHQ6NVY1 386 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 EFL1Q7Z2Z2 1120 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 LACTBL1A8MY62 500 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 RALBP11234 206 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 IMPG1Q17R60 797 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 ARHGAP15Q53QZ3 475 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 CMTM5Q96DZ9 223 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 BTBD6Q96KE9 485 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 INPP4AQ96PE3 977 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 UBE2OQ9C0C9 1292 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DYRK4Q9NR20 520 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TLR8Q9NR97 1041 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 C20orf96Q9NUD7 363 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 NVLO15381 856 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 GYS2P54840 703 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 NAB1Q13506 487 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 NRBF2Q96F24 287 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SIKE1Q9BRV8 207 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 ANKZF1Q9H8Y5 726 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 CHST12Q9NRB3 414 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 PCYOX1Q9UHG3 505 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DDX60LQ5H9U9 1706 aaKnown RBP11.98□□□□□ -0.49
PTCH1-208ENST00000430669 PBX1P40424 430 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 NDST1P52848 882 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 TMBIM4Q9HC24 238 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 AP4E1Q9UPM8 1137 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 SH3BP1Q9Y3L3 701 aa11.98□□□□□ -0.49
PTCH1-208ENST00000430669 DDX3XO00571 662 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 PYGBP11216 843 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SERPINB8P50452 374 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 C12orf42Q96LP6 360 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 OSMRQ99650 979 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ZBTB48P10074 688 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 GLRA2P23416 452 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 DNAJB2P25686 324 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 KRT33BQ14525 404 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 EPS8L1Q8TE68 723 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 XPO6Q96QU8 1125 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 L3MBTL1Q9Y468 752 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 PPP1R11O60927 126 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SESN2P58004 480 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 BAP1Q92560 729 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 FTHL17Q9BXU8 183 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 CPSF2Q9P2I0 782 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 FRMD3A2A2Y4 597 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 TMEM247A6NEH6 219 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ITGB5P18084 799 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ABCE1P61221 599 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms