RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 RAPGEF5Q92565 580 aa23.19■■□□□ 1.3
VSX1-205ENST00000429762 HEXIM1O94992 359 aaKnown RBP23.18■■□□□ 1.3
VSX1-205ENST00000429762 MYBL2P10244 700 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 SLC8A3P57103 927 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 YWHAHQ04917 246 aaPredicted RBP23.18■■□□□ 1.3
VSX1-205ENST00000429762 SMC1AQ14683 1233 aaKnown RBP23.18■■□□□ 1.3
VSX1-205ENST00000429762 ANKLE1Q8NAG6 615 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 HSFY1Q96LI6 401 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 PKMYT1Q99640 499 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 MARCH5Q9NX47 278 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 LCMT1Q9UIC8 334 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 TRIM43BA6NCK2 446 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 ZRANB2O95218 330 aaKnown RBP eCLIP23.18■■□□□ 1.3
VSX1-205ENST00000429762 TYMPP19971 482 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 BDNFP23560 247 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 MIPP30301 263 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 CTCFP49711 727 aaPredicted RBP23.18■■□□□ 1.3
VSX1-205ENST00000429762 ADCY1Q08828 1119 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 FAM171BQ6P995 826 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 CEP57Q86XR8 500 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 THEM5Q8N1Q8 247 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 UBE2Q2Q8WVN8 375 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 TRIM43Q96BQ3 446 aaPredicted RBP23.18■■□□□ 1.3
VSX1-205ENST00000429762 PEBP4Q96S96 227 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 STIM2Q9P246 746 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 VWA8A3KMH1 1905 aa23.18■■□□□ 1.3
VSX1-205ENST00000429762 GOLGA6L10A0A0M3HER8 536 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 TMEM189-UBE2V1I3L0A0 370 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 KRT10P13645 584 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 ACADSBP45954 432 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 SNX16P57768 344 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 GUCY2DQ02846 1103 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 TRADDQ15628 312 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 KAZNQ674X7 775 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 WDR93Q6P2C0 686 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 MFSD7Q6UXD7 560 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 TMEM173Q86WV6 379 aaPredicted RBP23.17■■□□□ 1.3
VSX1-205ENST00000429762 EXD1Q8NHP7 514 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 SLITRK1Q96PX8 696 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 FAM118BQ9BPY3 351 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 CNPY3Q9BT09 278 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 LRRC4Q9HBW1 653 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 ASNSD1Q9NWL6 643 aa23.17■■□□□ 1.3
VSX1-205ENST00000429762 TTI1O43156 1089 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 PARNO95453 639 aaKnown RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 BRD3Q15059 726 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 TTC27Q6P3X3 843 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 CNKSR3Q6P9H4 555 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 C1orf54Q8WWF1 131 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 PLVAPQ9BX97 442 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 ADAM33Q9BZ11 813 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 GPR62Q9BZJ7 368 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 NGRNQ9NPE2 291 aaKnown RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 NLRC5Q86WI3 1866 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 LRRD1A4D1F6 860 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 FSCN2O14926 492 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 RNF8O76064 485 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 TKTL1P51854 596 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 ADCY2Q08462 1091 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 IKBKEQ14164 716 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 GLE1Q53GS7 698 aaKnown RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 LRRC38Q5VT99 294 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 FAM117BQ6P1L5 589 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 TMCO3Q6UWJ1 677 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 ZDHHC17Q8IUH5 632 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 SPATA18Q8TC71 538 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 BCL7CQ8WUZ0 217 aaPredicted RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 ATG4AQ8WYN0 398 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 HSPH1Q92598 858 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 MAGOHBQ96A72 148 aaKnown RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 SMARCD1Q96GM5 515 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 OSBPL8Q9BZF1 889 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 EPB41L5Q9HCM4 733 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 CYLDQ9NQC7 956 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 ADAM28Q9UKQ2 775 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 R3HDM2Q9Y2K5 976 aaKnown RBP23.16■■□□□ 1.3
VSX1-205ENST00000429762 FAN1Q9Y2M0 1017 aa23.16■■□□□ 1.3
VSX1-205ENST00000429762 HOXA2O43364 376 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 PHF2O75151 1096 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 CSF2RAP15509 400 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 PAX3P23760 479 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 SDC4P31431 198 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 TSPY1Q01534 308 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 SNX1Q13596 522 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 FAM171A1Q5VUB5 890 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 SLC26A9Q7LBE3 791 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 SIX6OS1Q8N1H7 587 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 FAM172AQ8WUF8 416 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 FAM149B1Q96BN6 582 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 TRIM51Q9BSJ1 452 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 ULBP1Q9BZM6 244 aa23.15■■□□□ 1.3
VSX1-205ENST00000429762 CCDC151A5D8V7 595 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 DPYSL4O14531 572 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 TRUB2O95900 331 aaKnown RBP23.14■■□□□ 1.3
VSX1-205ENST00000429762 ATXN1P54253 815 aaKnown RBP23.14■■□□□ 1.3
VSX1-205ENST00000429762 CLUL1Q15846 466 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 HADHQ16836 314 aaKnown RBP23.14■■□□□ 1.3
VSX1-205ENST00000429762 SLC39A12Q504Y0 691 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 SPOCD1Q6ZMY3 1216 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 HFE2Q6ZVN8 426 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms