RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 RAB23Q9ULC3 237 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 PSMA7O14818 248 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 CHRNB1P11230 501 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 ASPAP45381 313 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 SLC5A3P53794 718 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 NRLP54845 237 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 PPP3CAQ08209 521 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 KRT39Q6A163 491 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 MAML2Q8IZL2 1156 aaPredicted RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 TMEM174Q8WUU8 243 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 OSCP1Q8WVF1 389 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
SNHG17-205ENST00000424235 HPS4Q9NQG7 708 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 PCDHGA2Q9Y5H1 932 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 CPQQ9Y646 472 aa17.09■□□□□ 0.33
SNHG17-205ENST00000424235 ZNF638Q14966 1978 aaKnown RBP17.08■□□□□ 0.33
SNHG17-205ENST00000424235 ZNF840PA6NDX5 716 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 SHISA7A6NL88 538 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 NFATC1O95644 943 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 SATB1Q01826 763 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 USP4Q13107 963 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 ZNF77Q15935 545 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 ZNF394Q53GI3 561 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 PRR23BQ6ZRT6 265 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 UNC93AQ86WB7 457 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 TTLL2Q9BWV7 592 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 ECT2Q9H8V3 914 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
SNHG17-205ENST00000424235 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
SNHG17-205ENST00000424235 LEFTY2O00292 366 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 GTF2H1P32780 548 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
SNHG17-205ENST00000424235 FZD5Q13467 585 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 C1orf220Q5T0J3 134 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 KIAA2013Q8IYS2 634 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 SPEM1Q8N4L4 309 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 C12orf29Q8N999 325 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 FBXL13Q8NEE6 735 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 RIN3Q8TB24 985 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 TIGD1Q96MW7 591 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 P2RY13Q9BPV8 354 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 CYP3A43Q9HB55 503 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 GMIPQ9P107 970 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 CFAP97Q9P2B7 532 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 CHORDC1Q9UHD1 332 aaPredicted RBP17.07■□□□□ 0.32
SNHG17-205ENST00000424235 SH3BP1Q9Y3L3 701 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 COL4A2P08572 1712 aa17.07■□□□□ 0.32
SNHG17-205ENST00000424235 TRIM49BA6NDI0 452 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 BIN1O00499 593 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 IRF1P10914 325 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 PFKLP17858 780 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 LPAL2Q16609 132 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 HECTD3Q5T447 861 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 DDX42Q86XP3 938 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 HEXIM2Q96MH2 286 aaKnown RBP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 TMEM30AQ9NV96 361 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 ARMCX3Q9UH62 379 aaPredicted RBP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 SMG5Q9UPR3 1016 aaKnown RBP17.06■□□□□ 0.32
SNHG17-205ENST00000424235 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
SNHG17-205ENST00000424235 PATJQ8NI35 1801 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 FANCMQ8IYD8 2048 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 OTOL1A6NHN0 477 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-205ENST00000424235 SLC9A3R1O14745 358 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-205ENST00000424235 SLC16A3O15427 465 aaKnown RBP17.05■□□□□ 0.32
SNHG17-205ENST00000424235 GJA4P35212 333 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 SYNPOQ8N3V7 929 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 RUBCNQ92622 972 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 CD101Q93033 1021 aa17.05■□□□□ 0.32
SNHG17-205ENST00000424235 CHFRQ96EP1 664 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms