RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 FAM107BQ9H098 131 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 GPATCH2LQ9NWQ4 482 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 CTNNAL1Q9UBT7 734 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 FOXO6A8MYZ6 492 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 ANKRD65E5RJM6 399 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 PTGESO14684 152 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 AGTP01019 485 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 TFE3P19532 575 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-202ENST00000414675 MMP13P45452 471 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 SLC6A3Q01959 620 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 RNASEH2BQ5TBB1 312 aaKnown RBP16.1■□□□□ 0.17
LRCH3-202ENST00000414675 MFSD5Q6N075 450 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 NPNTQ6UXI9 565 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 B4GALNT4Q76KP1 1039 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 NLRP14Q86W24 1093 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 NME8Q8N427 588 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 CCHCR1Q8TD31 782 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 ZFP42Q96MM3 310 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 ROPN1BQ9BZX4 212 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-202ENST00000414675 ROPN1Q9HAT0 212 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-202ENST00000414675 PCDH9Q9HC56 1237 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 GDAP2Q9NXN4 497 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 CACNG4Q9UBN1 327 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 HESX1Q9UBX0 185 aa16.1■□□□□ 0.17
LRCH3-202ENST00000414675 TPX2Q9ULW0 747 aaKnown RBP16.1■□□□□ 0.17
LRCH3-202ENST00000414675 DPYSL4O14531 572 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 GNL1P36915 607 aaPredicted RBP16.09■□□□□ 0.17
LRCH3-202ENST00000414675 NRLP54845 237 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 CDH6P55285 790 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 FASTKD3Q14CZ7 662 aaKnown RBP16.09■□□□□ 0.17
LRCH3-202ENST00000414675 FAM182AQ5T1J6 154 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
LRCH3-202ENST00000414675 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 LIMS2Q7Z4I7 341 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 OSTM1Q86WC4 334 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 RELL1Q8IUW5 271 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 CRYBG2Q8N1P7 616 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
LRCH3-202ENST00000414675 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
LRCH3-202ENST00000414675 E7EVH7 732 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 DUSP11O75319 330 aaKnown RBP16.08■□□□□ 0.17
LRCH3-202ENST00000414675 PGK1P00558 417 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 GNAT1P11488 350 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 MAGEA4P43358 317 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 TAF6P49848 677 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 CORO7P57737 925 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 GAD2Q05329 585 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 DPYSL3Q14195 570 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 ZC3H12AQ5D1E8 599 aaKnown RBP16.08■□□□□ 0.17
LRCH3-202ENST00000414675 GNASQ5JWF2 1037 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 ZNF560Q96MR9 790 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 CCT8L2Q96SF2 557 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 SELENOSQ9BQE4 189 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 SAYSD1Q9NPB0 183 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 GABRQQ9UN88 632 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.17
LRCH3-202ENST00000414675 APOC4-APOC2K7ER74 178 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 TRAPPC3O43617 180 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 APOC2P02655 101 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 CHN1P15882 459 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 TKTP29401 623 aaKnown RBP16.08■□□□□ 0.16
LRCH3-202ENST00000414675 CDR1P51861 262 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 MRPS6P82932 125 aaKnown RBP16.08■□□□□ 0.16
LRCH3-202ENST00000414675 CA9Q16790 459 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 NBPF20Q3BBV1 942 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 HP1BP3Q5SSJ5 553 aaPredicted RBP16.08■□□□□ 0.16
LRCH3-202ENST00000414675 GDF6Q6KF10 455 aaPredicted RBP16.08■□□□□ 0.16
LRCH3-202ENST00000414675 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 CROCCP2Q86T23 111 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 EXOC3L1Q86VI1 746 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 TTC13Q8NBP0 860 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 ZNF473Q8WTR7 871 aaKnown RBP16.08■□□□□ 0.16
LRCH3-202ENST00000414675 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 TRIB2Q92519 343 aa16.08■□□□□ 0.16
LRCH3-202ENST00000414675 PRPSAP2O60256 369 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 CYBAP13498 195 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 CREB1P16220 341 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 IL4RP24394 825 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 LILRA4P59901 499 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 TRIM32Q13049 653 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 TAB3Q8N5C8 712 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 ANKRD52Q8NB46 1076 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 CNOT10Q9H9A5 744 aaKnown RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 RSAD1Q9HA92 442 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 SRRM3A6NNA2 597 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-202ENST00000414675 ATP2C2O75185 946 aa16.07■□□□□ 0.16
LRCH3-202ENST00000414675 BANF1O75531 89 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms