RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CCINQ13939 588 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 MTF1Q14872 753 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 FBXO43Q4G163 708 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 KRT39Q6A163 491 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 DDX42Q86XP3 938 aaKnown RBP eCLIP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 CPA6Q8N4T0 437 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 RUBCNQ92622 972 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 SECISBP2LQ93073 1101 aaKnown RBP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 CHAMP1Q96JM3 812 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 CYP2S1Q96SQ9 504 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 TSG101Q99816 390 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 SMG9Q9H0W8 520 aaKnown RBP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 FBXO44Q9H4M3 255 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 GDPD2Q9HCC8 539 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 TMEM8AQ9HCN3 771 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 DUS2Q9NX74 493 aaKnown RBP15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 IL37Q9NZH6 218 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 MAPK8IP1Q9UQF2 711 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 R4GN57 208 aa15.44■□□□□ 0.06
NIF3L1-205ENST00000409588 PTPRZ1P23471 2315 aaPredicted RBP15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 HLA-DRAP01903 254 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 EPB41P11171 864 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 PIK3CAP42336 1068 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 IFNAR2P48551 515 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 TUBP50607 506 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 TNK2Q07912 1038 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 INCA1Q0VD86 236 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 STIM1Q13586 685 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 ZNF77Q15935 545 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 TMEM196Q5HYL7 178 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 C1orf220Q5T0J3 134 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 ARL14EPQ8N8R7 260 aaPredicted RBP15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 SMARCE1Q969G3 411 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 DPEP3Q9H4B8 488 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 EBF3Q9H4W6 596 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 SMYD3Q9H7B4 428 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 CSNK1G1Q9HCP0 422 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 NME7Q9Y5B8 376 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 RIF1Q5UIP0 2472 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 DENND4CQ5VZ89 1909 aa15.43■□□□□ 0.06
NIF3L1-205ENST00000409588 FAM92AA1XBS5 289 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 C2orf78A6NCI8 922 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 OLFM2O95897 454 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 USP46P62068 366 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 LRRC63Q05C16 580 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 TAF10Q12962 218 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 PON2Q15165 354 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 CCDC142Q17RM4 750 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 TXNDC11Q6PKC3 985 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 SUMF1Q8NBK3 374 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 SH3RF2Q8TEC5 729 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 SLC22A12Q96S37 553 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 HNRNPABQ99729 332 aaKnown RBP15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 DUSP9Q99956 384 aaKnown RBP15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 NT5C1AQ9BXI3 368 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 ZNF518BQ9C0D4 1074 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 ECT2Q9H8V3 914 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 PNPLA8Q9NP80 782 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 HPS4Q9NQG7 708 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 TBC1D14Q9P2M4 693 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 TICRRQ7Z2Z1 1910 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 COL4A2P08572 1712 aa15.42■□□□□ 0.06
NIF3L1-205ENST00000409588 DMDP11532 3685 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 CCDC163A0A0D9SF12 145 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 TNFRSF10BO14763 440 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 NFATC1O95644 943 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 OAS1P00973 400 aaKnown RBP15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 TDGF1P13385 188 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 PRCPP42785 496 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 ASPAP45381 313 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 SOX9P48436 509 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 GCLMP48507 274 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 NDST1P52848 882 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 USP4Q13107 963 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 PNOCQ13519 176 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 EML3Q32P44 896 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 WDR44Q5JSH3 913 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 PAQR9Q6ZVX9 377 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 ACOT1Q86TX2 421 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 FAM35AQ86V20 835 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 FUKQ8N0W3 1084 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 OTUB2Q96DC9 234 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 DHTKD1Q96HY7 919 aaPredicted RBP15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 KCNK16Q96T55 309 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 P2RY13Q9BPV8 354 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 NIF3L1Q9GZT8 377 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
NIF3L1-205ENST00000409588 CHURC1-FNTBB4DL54 471 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 CLDN5O00501 218 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 AP1G2O75843 785 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 GJA4P35212 333 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms