RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 NEU2Q9Y3R4 380 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TRAV19A0A0A6YYK7 116 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 GTPBP10A4D1E9 387 aaKnown RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 OPHN1O60890 802 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 PNMA6AP0CW24 399 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 GZMAP12544 262 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 CLCN6P51797 869 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 ATXN3P54252 364 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TRADDQ15628 312 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 PABPC1LQ4VXU2 614 aaKnown RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TATDN1Q6P1N9 297 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 FAM131BQ86XD5 332 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 SKA1Q96BD8 255 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 OTUB1Q96FW1 271 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 MS4A14Q96JA4 679 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 SENP8Q96LD8 212 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 FRMD8Q9BZ67 464 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 SEMA6BQ9H3T3 888 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TSPAN16Q9UKR8 245 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 SALL3Q9BXA9 1300 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 A0A1B0GUA9 196 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 CYTH3O43739 400 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 ENDOD1O94919 500 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 CSE1LP55060 971 aaKnown RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 ZBTB41Q5SVQ8 909 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 PHACTR4Q8IZ21 702 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 MTMR14Q8NCE2 650 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 EDEM1Q92611 657 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 GAS2L1Q99501 681 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 FRMD8P1Q9BZ68 369 aaPredicted RBP5.17□□□□□ -1.58
HDAC9-204ENST00000406451 DCLK3Q9C098 648 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TMEM134Q9H6X4 195 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 CHMP2BQ9UQN3 213 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 MYH3P11055 1940 aa5.17□□□□□ -1.58
HDAC9-204ENST00000406451 TARSL2A2RTX5 802 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 E2F6O75461 281 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FARP2O94887 1054 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ITGALP20701 1170 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TGM2P21980 687 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 SGCGQ13326 291 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TTI2Q6NXR4 508 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PKN3Q6P5Z2 889 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 GSPT2Q8IYD1 628 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ZNF669Q96BR6 464 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ACSF2Q96CM8 615 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 MTBPQ96DY7 904 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TRABDQ9H4I3 376 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 NT5MQ9NPB1 228 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FBXL5Q9UKA1 691 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ATRNO75882 1429 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 NDUFV1P49821 464 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ARHGDIAP52565 204 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 CRYBB1P53674 252 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ITGA7Q13683 1181 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FAM133BQ5BKY9 247 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TFDP3Q5H9I0 405 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 LLGL2Q6P1M3 1020 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 SLC47A2Q86VL8 602 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 LRRC43Q8N309 656 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ZNF557Q8N988 423 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 SLC2A14Q8TDB8 520 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FAM118BQ9BPY3 351 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PPCSQ9HAB8 311 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PKD2L2Q9NZM6 624 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TRMT6Q9UJA5 497 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 UBIAD1Q9Y5Z9 338 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 F8VZ95 297 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 RHOBTB1O94844 696 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PAEPP09466 180 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 MYL2P10916 166 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ZNF200P98182 395 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 C1QBPQ07021 282 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FNDC3BQ53EP0 1204 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 CENPPQ6IPU0 288 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 MRNIPQ6NTE8 343 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 BTNL9Q6UXG8 535 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 DENND5BQ6ZUT9 1274 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 FAM47EQ6ZV65 393 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 UPF1Q92900 1129 aaKnown RBP eCLIP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 GBP5Q96PP8 586 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TGS1Q96RS0 853 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 WDR24Q96S15 920 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 SPECC1L-ADORA2AF8WAN1 911 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ZW10O43264 779 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 BRAFP15056 766 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 CD52P31358 61 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 SLC12A3P55017 1021 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ZNF280AP59817 542 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PPIGQ13427 754 aaKnown RBP eCLIP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 ILDR1Q86SU0 546 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PPIL6Q8IXY8 311 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 MSL3Q8N5Y2 521 aaKnown RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 LRRC37BQ96QE4 947 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 TRIM51Q9BSJ1 452 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 THAP2Q9H0W7 228 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 MLXIPLQ9NP71 852 aa5.16□□□□□ -1.58
HDAC9-204ENST00000406451 PSMC3IPQ9P2W1 217 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-204ENST00000406451 NCKAP1Q9Y2A7 1128 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms