RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZC3H18Q86VM9 953 aaKnown RBP7.33□□□□□ -1.24
RAB5B-201ENST00000360299 ZDHHC17Q8IUH5 632 aa7.33□□□□□ -1.24
RAB5B-201ENST00000360299 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
RAB5B-201ENST00000360299 TGS1Q96RS0 853 aaKnown RBP7.33□□□□□ -1.24
RAB5B-201ENST00000360299 SERPINI1Q99574 410 aa7.33□□□□□ -1.24
RAB5B-201ENST00000360299 TSEN34Q9BSV6 310 aaKnown RBP7.33□□□□□ -1.24
RAB5B-201ENST00000360299 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF112Q9UJU3 913 aa7.33□□□□□ -1.24
RAB5B-201ENST00000360299 LRP5O75197 1615 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PIK3R2O00459 728 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 KCNN4O15554 427 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PAEPP09466 180 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PRAMEP78395 509 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CREMQ03060 361 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PPARDQ03181 441 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 UBXN2BQ14CS0 331 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 NFE2Q16621 373 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 FSCBQ5H9T9 825 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 GJB7Q6PEY0 223 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 SPATA20Q8TB22 786 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ETNPPLQ8TBG4 499 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 EFHD1Q9BUP0 239 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 DNAJC18Q9H819 358 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 BRD9Q9H8M2 597 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 FAM49BQ9NUQ9 324 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 TRIM10Q9UDY6 481 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 BAG5Q9UL15 447 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 NDRG2Q9UN36 371 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 EIF4E1BA6NMX2 242 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 EEF2KO00418 725 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CST8O60676 142 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 COILP38432 576 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PMS1P54277 932 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 MRPS25P82663 173 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PTPN11Q06124 597 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 BMT2Q1RMZ1 405 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CACUL1Q86Y37 369 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CCNJLQ8IV13 435 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CCDC60Q8IWA6 550 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 DNAJC19Q96DA6 116 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 TMEM176AQ96HP8 235 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 TSPAN18Q96SJ8 248 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CNPY3Q9BT09 278 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PRDM12Q9H4Q4 367 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CISHQ9NSE2 258 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 MRGBPQ9NV56 204 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PADI3Q9ULW8 664 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 SPATA31C2B4DYI2 1134 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 KLRC4O43908 158 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 HSPA4LO95757 839 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 TTC4O95801 387 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PRKCIP41743 596 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ACAP1Q15027 740 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 USP41Q3LFD5 358 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 C1orf131Q8NDD1 294 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 EXD1Q8NHP7 514 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 SPATA18Q8TC71 538 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 N4BP2L2Q92802 583 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 SGSM3Q96HU1 749 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 MS4A14Q96JA4 679 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PTPN18Q99952 460 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 AVENQ9NQS1 362 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.244e-8■■■□□ 15.4
RAB5B-201ENST00000360299 NEU2Q9Y3R4 380 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 NHSQ6T4R5 1651 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 SF3B1O75533 1304 aaKnown RBP eCLIP7.32□□□□□ -1.242e-7■■■■■ 66.8
RAB5B-201ENST00000360299 CCDC160A6NGH7 325 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 H0YGN5 161 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 NCAM2O15394 837 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PJA2O43164 708 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PROSCO94903 275 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 PFKMP08237 780 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 CRYBB1P53674 252 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 STARD3Q14849 445 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 TTC19Q6DKK2 380 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 OVOS1Q6IE37 1185 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF571Q7Z3V5 609 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF467Q7Z7K2 595 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 MCUQ8NE86 351 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 XAB2Q9HCS7 855 aaKnown RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 RAB6BQ9NRW1 208 aa7.32□□□□□ -1.24
RAB5B-201ENST00000360299 BARX2Q9UMQ3 279 aaPredicted RBP7.32□□□□□ -1.24
RAB5B-201ENST00000360299 ABHD14A-ACY1A0A1B0GW23 586 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 PLEKP08567 350 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 HSPA9P38646 679 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF268Q14587 947 aaPredicted RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 RRP1BQ14684 758 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 RBBP5Q15291 538 aaKnown RBP7.31□□□□□ -1.24
RAB5B-201ENST00000360299 CLEC16AQ2KHT3 1053 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 DCAF6Q58WW2 860 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 FBXO47Q5MNV8 452 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 TMEM63BQ5T3F8 832 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF618Q5T7W0 954 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 HOMEZQ8IX15 550 aa7.31□□□□□ -1.24
RAB5B-201ENST00000360299 NAT9Q9BTE0 207 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms