RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RPS6P62753 249 aaKnown RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 GIT2Q14161 759 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 CATSPER1Q8NEC5 780 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 CLPTM1LQ96KA5 538 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 PWWP2AQ96N64 755 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ZSWIM1Q9BR11 485 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 GPRC5CQ9NQ84 441 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TRNAU1APQ9NX07 287 aaKnown RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 PSMC3P17980 439 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 EMC2Q15006 297 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 KCTD17Q8N5Z5 321 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 CDC26Q8NHZ8 85 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 SPATA18Q8TC71 538 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 C1orf232A0A0U1RR37 186 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 AIM2O14862 343 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 NDUFB5O43674 189 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 OR6B1O95007 311 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ALADP13716 330 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 LCP1P13796 627 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 CBWD1Q9BRT8 395 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 TMEM39BQ9GZU3 492 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
NPHP3-201ENST00000337331 TMC5Q6UXY8 1006 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 NRBF2Q96F24 287 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ZBED2Q9BTP6 218 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 PCDH18Q9HCL0 1135 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 XPO7Q9UIA9 1087 aaKnown RBP16.67■□□□□ 0.26
NPHP3-201ENST00000337331 ORC6Q9Y5N6 252 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 MROH7Q68CQ1 1323 aa16.67■□□□□ 0.26
NPHP3-201ENST00000337331 MAGEB3O15480 346 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 MOCS2O96007 188 aaPredicted RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 HMOX2P30519 316 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ARPC4P59998 168 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ITPRIPL1Q6GPH6 555 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 HEATR4Q86WZ0 1026 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ALKBH8Q96BT7 664 aaKnown RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 GCOM2Q9BZD3 368 aaPredicted RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 GIMAP4Q9NUV9 329 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 NINJ2Q9NZG7 142 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 C15orf38-AP3S2A0A0A6YYH1 394 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ITGADQ13349 1161 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 FASTKD1Q53R41 847 aaKnown RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ARPINQ7Z6K5 226 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 BGNP21810 368 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 GTF2H1P32780 548 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 OTOAQ7RTW8 1153 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ARHGEF26Q96DR7 871 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 CACYBPQ9HB71 228 aaKnown RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 TAGLN3Q9UI15 199 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 MYL3P08590 195 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 VCLP18206 1134 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 CDH3P22223 829 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 S100A1P23297 94 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 ANKRD23Q86SG2 305 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 PDCD6IPQ8WUM4 868 aaKnown RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 OXNAD1Q96HP4 312 aaPredicted RBP16.66■□□□□ 0.26
NPHP3-201ENST00000337331 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
NPHP3-201ENST00000337331 PXDNQ92626 1479 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 SGPL1O95470 568 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 UQCRBP14927 111 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 NEK2P51955 445 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 FOLH1Q04609 750 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CDR2LQ86X02 465 aaPredicted RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 ACSF2Q96CM8 615 aaPredicted RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CCDC28BQ9BUN5 200 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 TIMMDC1Q9NPL8 285 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 ASB3Q9Y575 518 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 IGSF9BQ9UPX0 1349 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 EDF1O60869 148 aaKnown RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 AMPD1P23109 780 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 AQP5P55064 265 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 APOBEC3FQ8IUX4 373 aaKnown RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 PPP1R14BQ96C90 147 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CCDC78A2IDD5 438 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CCNB1P14635 433 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 TRPC1P48995 793 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms