RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 HSFX1Q9UBD0 423 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 APEX2Q9UBZ4 518 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 PRKAG2Q9UGJ0 569 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 C5orf42Q9H799 3197 aa10.83□□□□□ -0.68
ABCF1-201ENST00000326195 KRT36O76013 467 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 POMCP01189 267 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 ERFP50548 548 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 RTP1P59025 263 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 NECAB2Q7Z6G3 386 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 SDCCAG8Q86SQ7 713 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 JAMLQ86YT9 394 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 MIPEPQ99797 713 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 GOLGA2P5Q9HBQ8 144 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 PADI3Q9ULW8 664 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 USH1CQ9Y6N9 552 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 EIF3DO15371 548 aaKnown RBP eCLIP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 CALCAP01258 141 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 FTLP02792 175 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 ADSSP30520 456 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 SKIV2L2P42285 1042 aaKnown RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 DEUP1Q05D60 604 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 SCARA5Q6ZMJ2 495 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 INTS8Q75QN2 995 aaKnown RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 APLFQ8IW19 511 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 FIZ1Q96SL8 496 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 PAK6Q9NQU5 681 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 OLFML3Q9NRN5 406 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 EXOC7Q9UPT5 735 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 DDX3XO00571 662 aaKnown RBP eCLIP10.82□□□□□ -0.686e-21■■■■■ 26.8
ABCF1-201ENST00000326195 CSF2RAP15509 400 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 NAMPTP43490 491 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 GATMP50440 423 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 PTENP60484 403 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 BFSP1Q12934 665 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 RCN1Q15293 331 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 AMHR2Q16671 573 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 RHOT2Q8IXI1 618 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 EMID1Q96A84 441 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 MRPL4Q9BYD3 311 aaKnown RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 SLCO1B3Q9NPD5 702 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 PCDHA2Q9Y5H9 948 aa10.82□□□□□ -0.68
ABCF1-201ENST00000326195 PRRC2BQ5JSZ5 2229 aaKnown RBP10.82□□□□□ -0.68
ABCF1-201ENST00000326195 VCANP13611 3396 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 PDLIM1O00151 329 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TBX10O75333 385 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ACSL3O95573 720 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 MAPTP10636 758 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TAC1P20366 129 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ANXA13P27216 316 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 VAMP7P51809 220 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 WNT7BP56706 349 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 MRPS6P82932 125 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ORC1Q13415 861 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SLFN11Q7Z7L1 901 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 XXYLT1Q8NBI6 393 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 HES6Q96HZ4 224 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 GBP5Q96PP8 586 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ADPGKQ9BRR6 497 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SPATA16Q9BXB7 569 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ASIC3Q9UHC3 531 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 CHORDC1Q9UHD1 332 aaPredicted RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TET1Q8NFU7 2136 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 FAM200BP0CF97 657 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 CKBP12277 381 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 CETN2P41208 172 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 BCAR1P56945 870 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 CLUL1Q15846 466 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SPDYCQ5MJ68 293 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SPOUT1Q5T280 376 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SLC39A4Q6P5W5 647 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SLC39A5Q6ZMH5 540 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 DHX38Q92620 1227 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ZNF653Q96CK0 615 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TUBGCP5Q96RT8 1024 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 MKNK1Q9BUB5 465 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 DNAJC17Q9NVM6 304 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TBK1Q9UHD2 729 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 AJAP1Q9UKB5 411 aaPredicted RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ANKRD62A6NC57 917 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ADRB2P07550 413 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 VHLP40337 213 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SNRNP35Q16560 246 aaKnown RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 DBN1Q16643 649 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 ACSBG2Q5FVE4 666 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TTC27Q6P3X3 843 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 SLX1AQ9BQ83 275 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 HAPLN2Q9GZV7 340 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 THAP2Q9H0W7 228 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms