RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 UCHL3P15374 230 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 RNF148Q8N7C7 305 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 LRRC39Q96DD0 335 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 PIH1D1Q9NWS0 290 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SPACA6W5XKT8 324 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CBFBQ13951 182 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 REXO1L1PQ8IX06 675 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 LBPP18428 481 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 NUP107P57740 925 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 TCHHL1Q5QJ38 904 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 DSG4Q86SJ6 1040 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PMM1Q92871 262 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 STK33Q9BYT3 514 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 STK39Q9UEW8 545 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 HLA-DQA2P01906 255 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 GPR1P46091 355 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CRYMQ14894 314 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 SYDE1Q6ZW31 735 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PROSER1Q86XN7 944 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 MTFMTQ96DP5 389 aaKnown RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCDC3Q9BQI4 270 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 TDRKHQ9Y2W6 561 aaKnown RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PDHBP11177 359 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 KRT20P35900 424 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCR4P51679 360 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 GRM4Q14833 912 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 RIPOR1Q6ZS17 1223 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 MYOM2P54296 1465 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 H3BN98 237 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 SCGNO76038 276 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 LRG1P02750 347 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 IL12RB1P42701 662 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 KCNB1Q14721 858 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PIGBQ92521 554 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PHF21BQ96EK2 531 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 DNAJC16Q9Y2G8 782 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 A8MX80 341 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 MTRF1O75570 445 aaKnown RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 ATG7O95352 703 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PIK3R1P27986 724 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 EFNA5P52803 228 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZNF177Q13360 481 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 SNX17Q15036 470 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 DNAJC14Q6Y2X3 702 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 KBTBD2Q8IY47 623 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 KCTD14Q9BQ13 255 aaPredicted RBP12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 PCDHB7Q9Y5E2 793 aa12.86□□□□□ -0.35
ARFGEF1-201ENST00000262215 IDH3BO43837 385 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 EYA4O95677 639 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 CSHL1Q14406 222 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 AGAP9Q5VTM2 703 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 TTC39CQ8N584 583 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 RAD21L1Q9H4I0 556 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 PSTPIP1O43586 416 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 ITGB3P05106 788 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 STX5Q13190 355 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCSAPQ6IQ19 270 aaPredicted RBP12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 MIEF1Q9NQG6 463 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZMYND8Q9ULU4 1186 aaPredicted RBP12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 ASNA1O43681 348 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 IL6P05231 212 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 SLC2A4P14672 509 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 NDUFA5Q16718 116 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 ZBTB49Q6ZSB9 765 aa12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 PTAR1Q7Z6K3 402 aaPredicted RBP12.85□□□□□ -0.35
ARFGEF1-201ENST00000262215 STX12Q86Y82 276 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms