RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W YMR244WQ04018 355 aa4.51□□□□□ -1.69
RPN7YPR108W MSA1Q08471 629 aa4.51□□□□□ -1.69
RPN7YPR108W YPL257WQ08974 193 aa4.51□□□□□ -1.69
RPN7YPR108W YCL021W-AQ96VH3 125 aa4.51□□□□□ -1.69
RPN7YPR108W YKR032WP36127 104 aa4.5□□□□□ -1.69
RPN7YPR108W POP7P38291 140 aa4.5□□□□□ -1.69
RPN7YPR108W DFM1Q12743 341 aaKnown RBP4.5□□□□□ -1.69
RPN7YPR108W YKL023C-AQ2V2P3 75 aa4.5□□□□□ -1.69
RPN7YPR108W YGR240C-AQ3E786 66 aa4.5□□□□□ -1.69
RPN7YPR108W HYP2P23301 157 aaKnown RBP4.49□□□□□ -1.69
RPN7YPR108W RPL16BP26785 198 aaKnown RBP4.49□□□□□ -1.69
RPN7YPR108W YCR041WP37265 110 aa4.49□□□□□ -1.69
RPN7YPR108W DGA1Q08650 418 aa4.49□□□□□ -1.69
RPN7YPR108W YOR097CQ12274 175 aaPredicted RBP4.49□□□□□ -1.69
RPN7YPR108W BPH1P25356 2167 aa4.48□□□□□ -1.69
RPN7YPR108W YHR212W-AP0CX91 67 aa4.48□□□□□ -1.69
RPN7YPR108W NHP2P32495 156 aaPredicted RBP4.48□□□□□ -1.69
RPN7YPR108W AIM29P36154 155 aa4.48□□□□□ -1.69
RPN7YPR108W MIG3P39943 394 aa4.48□□□□□ -1.69
RPN7YPR108W YML122CQ03207 126 aa4.48□□□□□ -1.69
RPN7YPR108W YLR194CQ05777 254 aa4.48□□□□□ -1.69
RPN7YPR108W YLR042CQ07990 161 aa4.48□□□□□ -1.69
RPN7YPR108W YIL102C-AQ2V2P5 75 aa4.48□□□□□ -1.69
RPN7YPR108W SIM1P40472 476 aa4.47□□□□□ -1.69
RPN7YPR108W YLR112WQ12130 139 aa4.47□□□□□ -1.69
RPN7YPR108W PET8P38921 284 aa4.46□□□□□ -1.7
RPN7YPR108W VHS2P40463 436 aa4.46□□□□□ -1.7
RPN7YPR108W YDR274CP87283 123 aa4.46□□□□□ -1.7
RPN7YPR108W YLR296WQ05898 108 aa4.46□□□□□ -1.7
RPN7YPR108W ENV10Q99382 181 aa4.46□□□□□ -1.7
RPN7YPR108W URA2P07259 2214 aaKnown RBP4.46□□□□□ -1.7
RPN7YPR108W IRA1P18963 3092 aa4.46□□□□□ -1.7
RPN7YPR108W PRE1P22141 198 aaKnown RBP4.45□□□□□ -1.7
RPN7YPR108W YKR041WP36134 250 aa4.45□□□□□ -1.7
RPN7YPR108W YIL059CP40520 121 aa4.45□□□□□ -1.7
RPN7YPR108W AGE2P40529 298 aa4.45□□□□□ -1.7
RPN7YPR108W WWM1P43582 211 aaKnown RBP4.45□□□□□ -1.7
RPN7YPR108W AIM11P87275 137 aa4.45□□□□□ -1.7
RPN7YPR108W SGF11Q03067 99 aa4.45□□□□□ -1.7
RPN7YPR108W COA3Q3E7B2 85 aa4.45□□□□□ -1.7
RPN7YPR108W PRP8P33334 2413 aaKnown RBP4.45□□□□□ -1.7
RPN7YPR108W ADH1P00330 348 aaKnown RBP4.44□□□□□ -1.7
RPN7YPR108W YBR209WP38311 105 aa4.44□□□□□ -1.7
RPN7YPR108W SHU1P38751 150 aa4.44□□□□□ -1.7
RPN7YPR108W COX12Q01519 83 aa4.44□□□□□ -1.7
RPN7YPR108W SCW10Q04951 389 aa4.44□□□□□ -1.7
RPN7YPR108W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
RPN7YPR108W MBF1O14467 151 aaKnown RBP4.43□□□□□ -1.7
RPN7YPR108W YPR170W-BP0C5R9 85 aa4.43□□□□□ -1.7
RPN7YPR108W RPS8AP0CX39 200 aaKnown RBP4.43□□□□□ -1.7
RPN7YPR108W RPS8BP0CX40 200 aaKnown RBP4.43□□□□□ -1.7
RPN7YPR108W YHR130CP38834 111 aa4.43□□□□□ -1.7
RPN7YPR108W ERG28P40030 148 aa4.43□□□□□ -1.7
RPN7YPR108W RRT13P40042 185 aa4.43□□□□□ -1.7
RPN7YPR108W ARC15P40518 154 aaRIP-Chip data4.43□□□□□ -1.7not detected
RPN7YPR108W SPC1P46965 94 aa4.43□□□□□ -1.7
RPN7YPR108W YJR146WP47174 117 aa4.43□□□□□ -1.7
RPN7YPR108W YPS5P53057 165 aa4.43□□□□□ -1.7
RPN7YPR108W LSM6Q06406 86 aaKnown RBP4.43□□□□□ -1.7
RPN7YPR108W VAM10Q08474 114 aa4.43□□□□□ -1.7
RPN7YPR108W YMR122W-AQ3E842 84 aa4.43□□□□□ -1.7
RPN7YPR108W RPL18AP0CX49 186 aaKnown RBP4.42□□□□□ -1.7
RPN7YPR108W RPL18BP0CX50 186 aaKnown RBP4.42□□□□□ -1.7
RPN7YPR108W CUP1-1P0CX80 61 aa4.42□□□□□ -1.7
RPN7YPR108W CUP1-2P0CX81 61 aa4.42□□□□□ -1.7
RPN7YPR108W ATP15P21306 62 aa4.42□□□□□ -1.7
RPN7YPR108W RPL16AP26784 199 aaKnown RBP4.42□□□□□ -1.7
RPN7YPR108W OXA1P39952 402 aa4.42□□□□□ -1.7
RPN7YPR108W YPR013CQ12145 317 aa4.42□□□□□ -1.7
RPN7YPR108W UBC5P15732 148 aa4.41□□□□□ -1.7
RPN7YPR108W NRG2P38082 220 aa4.41□□□□□ -1.7
RPN7YPR108W YLR281CQ05863 155 aa4.41□□□□□ -1.7
RPN7YPR108W YMR175W-AQ3E766 64 aa4.41□□□□□ -1.7
RPN7YPR108W YOR020W-AQ3E824 90 aa4.41□□□□□ -1.7
RPN7YPR108W YOL085CQ99345 113 aa4.41□□□□□ -1.7
RPN7YPR108W IRA2P19158 3079 aa4.4□□□□□ -1.7
RPN7YPR108W MIG1P27705 504 aa4.4□□□□□ -1.71
RPN7YPR108W YDL241WQ07738 123 aa4.4□□□□□ -1.71
RPN7YPR108W CRC1Q12289 327 aa4.4□□□□□ -1.71
RPN7YPR108W COX10P21592 462 aa4.39□□□□□ -1.71
RPN7YPR108W YCR085WP25650 117 aa4.39□□□□□ -1.71
RPN7YPR108W ARO2P28777 376 aaKnown RBP4.39□□□□□ -1.71
RPN7YPR108W ABF2Q02486 183 aa4.39□□□□□ -1.71
RPN7YPR108W HPA2Q06592 156 aa4.39□□□□□ -1.71
RPN7YPR108W YBR056W-AI2HB52 66 aa4.38□□□□□ -1.71
RPN7YPR108W YPT53P36019 220 aa4.38□□□□□ -1.71
RPN7YPR108W YEL008WP40001 126 aa4.38□□□□□ -1.71
RPN7YPR108W YER085CP40058 173 aa4.38□□□□□ -1.71
RPN7YPR108W YIA6P40556 373 aa4.38□□□□□ -1.71
RPN7YPR108W CIN5P40917 295 aa4.38□□□□□ -1.71
RPN7YPR108W FIP1P45976 327 aa4.38□□□□□ -1.71
RPN7YPR108W YLR415CO13578 112 aa4.37□□□□□ -1.71
RPN7YPR108W CDC43P18898 376 aa4.37□□□□□ -1.71
RPN7YPR108W UGX2P32772 223 aa4.37□□□□□ -1.71
RPN7YPR108W ATX1P38636 73 aa4.37□□□□□ -1.71
RPN7YPR108W YGR025WP53216 100 aa4.37□□□□□ -1.71
RPN7YPR108W EOS1P53938 366 aa4.37□□□□□ -1.71
RPN7YPR108W TAR1Q8TGM6 124 aa4.37□□□□□ -1.71
RPN7YPR108W TOR1P35169 2470 aa4.37□□□□□ -1.71
RPN7YPR108W TOA2P32774 122 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 112.8 ms