RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C GPI19Q04082 140 aa2.61□□□□□ -1.99
RPA135YPR010C RPL28P02406 149 aaKnown RBP2.6□□□□□ -1.99
RPA135YPR010C YFL068WP0CX99 160 aa2.6□□□□□ -1.99
RPA135YPR010C YLL066W-AP0CY00 160 aa2.6□□□□□ -1.99
RPA135YPR010C YLL067W-AP0CY01 160 aa2.6□□□□□ -1.99
RPA135YPR010C SPT4P32914 102 aaPredicted RBP2.6□□□□□ -1.99
RPA135YPR010C YGR219WP53307 113 aa2.6□□□□□ -1.99
RPA135YPR010C PRM3Q08931 133 aa2.6□□□□□ -1.99
RPA135YPR010C CDC43P18898 376 aa2.6□□□□□ -1.99
RPA135YPR010C PAU16P35994 123 aa2.6□□□□□ -1.99
RPA135YPR010C RPL16BP26785 198 aaKnown RBP2.6□□□□□ -1.99
RPA135YPR010C YPS5P53057 165 aa2.6□□□□□ -1.99
RPA135YPR010C ELC1Q03071 99 aa2.6□□□□□ -1.99
RPA135YPR010C DGA1Q08650 418 aa2.6□□□□□ -1.99
RPA135YPR010C ATP15P21306 62 aa2.59□□□□□ -1.99
RPA135YPR010C AGA1P32323 725 aa2.59□□□□□ -1.99
RPA135YPR010C SRP21P32342 167 aa2.59□□□□□ -1.99
RPA135YPR010C YKR070WP36151 352 aaKnown RBP2.59□□□□□ -1.99
RPA135YPR010C TIR1P10863 254 aa2.59□□□□□ -2
RPA135YPR010C PRY2P36110 329 aa2.59□□□□□ -2
RPA135YPR010C YHR022CP38763 256 aa2.59□□□□□ -2
RPA135YPR010C YLR042CQ07990 161 aa2.59□□□□□ -2
RPA135YPR010C YPL162CQ12042 273 aa2.59□□□□□ -2
RPA135YPR010C RPL15AP05748 204 aaKnown RBP2.59□□□□□ -2
RPA135YPR010C SEC11P15367 167 aa2.59□□□□□ -2
RPA135YPR010C PEX22P39718 180 aa2.59□□□□□ -2
RPA135YPR010C YML122CQ03207 126 aa2.59□□□□□ -2
RPA135YPR010C YDL157CQ12082 118 aa2.59□□□□□ -2
RPA135YPR010C YPR063CQ12160 140 aa2.59□□□□□ -2
RPA135YPR010C YOR008C-AQ3E7B9 74 aa2.59□□□□□ -2
RPA135YPR010C YLR342W-AQ3E810 57 aa2.59□□□□□ -2
RPA135YPR010C TRA1P38811 3744 aa2.58□□□□□ -2
RPA135YPR010C YPL073CP40323 161 aa2.58□□□□□ -2
RPA135YPR010C DCV1P43595 202 aa2.58□□□□□ -2
RPA135YPR010C YDL085C-AQ3E7B7 68 aaKnown RBP2.58□□□□□ -2
RPA135YPR010C YGR035W-AQ45U48 73 aa2.58□□□□□ -2
RPA135YPR010C TAR1Q8TGM6 124 aa2.58□□□□□ -2
RPA135YPR010C INO2P26798 304 aa2.58□□□□□ -2
RPA135YPR010C YFR035CP43608 114 aa2.58□□□□□ -2
RPA135YPR010C FIP1P45976 327 aa2.58□□□□□ -2
RPA135YPR010C VPS71Q03433 280 aa2.58□□□□□ -2
RPA135YPR010C AIR2Q12476 344 aaKnown RBP2.58□□□□□ -2
RPA135YPR010C YLR363W-AQ3E747 85 aa2.58□□□□□ -2
RPA135YPR010C SVP26P38869 228 aa2.57□□□□□ -2
RPA135YPR010C YGL230CP53074 147 aa2.57□□□□□ -2
RPA135YPR010C MRP49P32388 137 aa2.57□□□□□ -2
RPA135YPR010C YNL217WP40152 326 aa2.57□□□□□ -2
RPA135YPR010C YML079WQ03629 201 aa2.57□□□□□ -2
RPA135YPR010C ADH1P00330 348 aaKnown RBP2.57□□□□□ -2
RPA135YPR010C AQY1P0CD91 305 aa2.57□□□□□ -2
RPA135YPR010C RPL2AP0CX45 254 aaKnown RBP2.57□□□□□ -2
RPA135YPR010C RPL2BP0CX46 254 aaKnown RBP2.57□□□□□ -2
RPA135YPR010C RPS11AP0CX47 156 aaKnown RBP2.57□□□□□ -2
RPA135YPR010C RPS11BP0CX48 156 aaKnown RBP2.57□□□□□ -2
RPA135YPR010C YMR244WQ04018 355 aa2.57□□□□□ -2
RPA135YPR010C RPL42AP0CX27 106 aaKnown RBP2.56□□□□□ -2
RPA135YPR010C RPL42BP0CX28 106 aaKnown RBP2.56□□□□□ -2
RPA135YPR010C PEX17P40155 199 aa2.56□□□□□ -2
RPA135YPR010C YNL190WP53872 204 aa2.56□□□□□ -2
RPA135YPR010C YBR200W-AQ3E755 54 aa2.56□□□□□ -2
RPA135YPR010C ARO2P28777 376 aaKnown RBP2.56□□□□□ -2
RPA135YPR010C PMP3P87284 55 aa2.55□□□□□ -2
RPA135YPR010C YCR075W-AQ3E830 75 aa2.55□□□□□ -2
RPA135YPR010C IGO2Q9P305 131 aa2.55□□□□□ -2
RPA135YPR010C PAI3P01094 68 aa2.55□□□□□ -2
RPA135YPR010C RPL16AP26784 199 aaKnown RBP2.55□□□□□ -2
RPA135YPR010C MRPS8Q03799 155 aa2.55□□□□□ -2
RPA135YPR010C SCW10Q04951 389 aa2.55□□□□□ -2
RPA135YPR010C YNL146C-AQ3E7Z1 64 aa2.55□□□□□ -2
RPA135YPR010C UTR5P32630 166 aa2.54□□□□□ -2
RPA135YPR010C YRA2P36036 203 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
RPA135YPR010C RRT13P40042 185 aa2.54□□□□□ -2
RPA135YPR010C BRP1P53194 125 aa2.54□□□□□ -2
RPA135YPR010C SMD1Q02260 146 aaPredicted RBP2.54□□□□□ -2
RPA135YPR010C YPL257WQ08974 193 aa2.54□□□□□ -2
RPA135YPR010C YLR122CQ12312 125 aa2.54□□□□□ -2
RPA135YPR010C ANB1P19211 157 aa2.54□□□□□ -2
RPA135YPR010C NRG2P38082 220 aa2.54□□□□□ -2
RPA135YPR010C BET5Q03630 159 aa2.54□□□□□ -2
RPA135YPR010C DFM1Q12743 341 aaKnown RBP2.54□□□□□ -2
RPA135YPR010C HYP2P23301 157 aaKnown RBP2.53□□□□□ -2
RPA135YPR010C YER181CP40097 107 aa2.53□□□□□ -2
RPA135YPR010C AIM11P87275 137 aa2.53□□□□□ -2
RPA135YPR010C DSE2P38844 325 aa2.53□□□□□ -2
RPA135YPR010C VTC1P40046 129 aaRIP-Chip data2.53□□□□□ -2not detected
RPA135YPR010C PAU23Q07987 124 aa2.53□□□□□ -2
RPA135YPR010C PAU17Q12370 124 aa2.53□□□□□ -2
RPA135YPR010C YER039C-AP0CD97 72 aa2.53□□□□□ -2.01
RPA135YPR010C NHP2P32495 156 aaPredicted RBP2.53□□□□□ -2.01
RPA135YPR010C YKL102CP34249 101 aa2.53□□□□□ -2.01
RPA135YPR010C PFY1P07274 126 aa2.52□□□□□ -2.01
RPA135YPR010C YCR007CP25354 239 aa2.52□□□□□ -2.01
RPA135YPR010C SLO1Q3E784 85 aa2.52□□□□□ -2.01
RPA135YPR010C MPC2P38857 129 aa2.52□□□□□ -2.01
RPA135YPR010C YEL008WP40001 126 aa2.52□□□□□ -2.01
RPA135YPR010C YDR042CQ03205 200 aa2.52□□□□□ -2.01
RPA135YPR010C YLR194CQ05777 254 aa2.52□□□□□ -2.01
RPA135YPR010C YDL022C-AP0C5L6 82 aa2.51□□□□□ -2.01
RPA135YPR010C HAL1Q01766 294 aa2.51□□□□□ -2.01
RPA135YPR010C YOR034C-AQ3E735 80 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms