RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YOR343CQ12484 108 aa-0.36□□□□□ -2.47
NIP100YPL174C SUA7P29055 345 aaPredicted RBP-0.36□□□□□ -2.47
NIP100YPL174C RPA12P32529 125 aaKnown RBP-0.36□□□□□ -2.47
NIP100YPL174C PHB1P40961 287 aa-0.36□□□□□ -2.47
NIP100YPL174C CMC2Q3E7A4 109 aa-0.36□□□□□ -2.47
NIP100YPL174C MED11Q99278 115 aa-0.36□□□□□ -2.47
NIP100YPL174C YSF3P0C074 85 aaPredicted RBP-0.37□□□□□ -2.47
NIP100YPL174C RPL35AP0CX84 120 aaKnown RBP-0.37□□□□□ -2.47
NIP100YPL174C RPL35BP0CX85 120 aaKnown RBP-0.37□□□□□ -2.47
NIP100YPL174C YAP3P38749 330 aa-0.37□□□□□ -2.47
NIP100YPL174C YOL164W-AQ3E7A5 60 aa-0.37□□□□□ -2.47
NIP100YPL174C CCW14O13547 238 aa-0.37□□□□□ -2.47
NIP100YPL174C HSP12P22943 109 aaKnown RBP-0.37□□□□□ -2.47
NIP100YPL174C SUI1P32911 108 aaKnown RBP-0.37□□□□□ -2.47
NIP100YPL174C POR2P40478 281 aa-0.37□□□□□ -2.47
NIP100YPL174C YPL067CQ02754 198 aa-0.37□□□□□ -2.47
NIP100YPL174C YIL046W-AQ3E7Z4 54 aa-0.37□□□□□ -2.47
NIP100YPL174C SEC7P11075 2009 aaKnown RBP-0.38□□□□□ -2.47
NIP100YPL174C EMP24P32803 203 aaKnown RBP-0.38□□□□□ -2.47
NIP100YPL174C GSP1P32835 219 aaKnown RBP-0.38□□□□□ -2.47
NIP100YPL174C MRPL11P36521 249 aaPredicted RBP-0.38□□□□□ -2.47
NIP100YPL174C RAV2Q03956 351 aa-0.38□□□□□ -2.47
NIP100YPL174C AIM4P38305 123 aaPredicted RBP-0.39□□□□□ -2.47
NIP100YPL174C UTP11P34247 250 aaPredicted RBP-0.4□□□□□ -2.47
NIP100YPL174C OCA6Q12454 224 aa-0.4□□□□□ -2.47
NIP100YPL174C ADK1P07170 222 aaKnown RBP-0.4□□□□□ -2.47
NIP100YPL174C DER1P38307 211 aa-0.4□□□□□ -2.47
NIP100YPL174C LSM8P47093 109 aaKnown RBP-0.4□□□□□ -2.47
NIP100YPL174C YDR210WQ03482 75 aa-0.4□□□□□ -2.47
NIP100YPL174C ARC19P33204 171 aaKnown RBP-0.41□□□□□ -2.47
NIP100YPL174C YCL001W-AP87012 153 aa-0.41□□□□□ -2.47
NIP100YPL174C SGF11Q03067 99 aa-0.41□□□□□ -2.47
NIP100YPL174C YOR385WQ08909 290 aa-0.41□□□□□ -2.47
NIP100YPL174C HAP3P13434 144 aa-0.41□□□□□ -2.48
NIP100YPL174C RME1P32338 300 aaKnown RBP-0.41□□□□□ -2.48
NIP100YPL174C SDH7Q04401 133 aa-0.41□□□□□ -2.48
NIP100YPL174C SRX1P36077 127 aa-0.42□□□□□ -2.48
NIP100YPL174C AME1P38313 324 aa-0.42□□□□□ -2.48
NIP100YPL174C VPS55P47111 140 aa-0.42□□□□□ -2.48
NIP100YPL174C EFG1Q3E705 233 aaKnown RBP-0.42□□□□□ -2.48
NIP100YPL174C LDB18Q07887 179 aa-0.43□□□□□ -2.48
NIP100YPL174C NSL1Q12143 216 aa-0.43□□□□□ -2.48
NIP100YPL174C QCR10P37299 77 aa-0.43□□□□□ -2.48
NIP100YPL174C COF1Q03048 143 aaKnown RBP-0.43□□□□□ -2.48
NIP100YPL174C YOR289WQ12012 251 aaPredicted RBP-0.43□□□□□ -2.48
NIP100YPL174C YDR278CQ05612 105 aa-0.44□□□□□ -2.48
NIP100YPL174C PET20Q99373 253 aa-0.44□□□□□ -2.48
NIP100YPL174C RTC6O14464 93 aa-0.44□□□□□ -2.48
NIP100YPL174C YCR108CQ3E819 63 aa-0.44□□□□□ -2.48
NIP100YPL174C YOR032W-AQ8TGS1 66 aa-0.44□□□□□ -2.48
NIP100YPL174C PAU21P0CE86 164 aa-0.45□□□□□ -2.48
NIP100YPL174C PAU22P0CE87 164 aa-0.45□□□□□ -2.48
NIP100YPL174C PAM16P42949 149 aa-0.45□□□□□ -2.48
NIP100YPL174C HHO1P53551 258 aa-0.45□□□□□ -2.48
NIP100YPL174C LCL1Q02786 101 aa-0.45□□□□□ -2.48
NIP100YPL174C GTT2Q12390 233 aa-0.45□□□□□ -2.48
NIP100YPL174C YGR240C-AQ3E786 66 aa-0.45□□□□□ -2.48
NIP100YPL174C Q0297Q9ZZV8 51 aa-0.45□□□□□ -2.48
NIP100YPL174C YEA6P39953 335 aa-0.45□□□□□ -2.48
NIP100YPL174C YIL134C-AQ45U18 67 aa-0.45□□□□□ -2.48
NIP100YPL174C YGR201CP42936 225 aa-0.46□□□□□ -2.48
NIP100YPL174C YGR164WP53291 111 aa-0.46□□□□□ -2.48
NIP100YPL174C YBR072C-AQ3E794 53 aa-0.46□□□□□ -2.48
NIP100YPL174C YFR009W-AP0C5M9 85 aa-0.46□□□□□ -2.48
NIP100YPL174C COX23P38824 151 aa-0.46□□□□□ -2.48
NIP100YPL174C YNL190WP53872 204 aa-0.46□□□□□ -2.48
NIP100YPL174C PRS3P38689 320 aaKnown RBP-0.47□□□□□ -2.48
NIP100YPL174C CYC2P38909 366 aa-0.47□□□□□ -2.48
NIP100YPL174C YIL163CP40448 117 aa-0.47□□□□□ -2.48
NIP100YPL174C YDR366CP87287 132 aa-0.47□□□□□ -2.48
NIP100YPL174C ARL3Q02804 198 aa-0.47□□□□□ -2.48
NIP100YPL174C AIM18P38884 321 aa-0.47□□□□□ -2.48
NIP100YPL174C YGL149WP53116 101 aa-0.47□□□□□ -2.48
NIP100YPL174C GRX3Q03835 250 aa-0.47□□□□□ -2.48
NIP100YPL174C PKR1Q03880 122 aaKnown RBP-0.47□□□□□ -2.48
NIP100YPL174C YML054C-AQ3E809 52 aa-0.47□□□□□ -2.48
NIP100YPL174C MPC1P53157 130 aaKnown RBP-0.48□□□□□ -2.49
NIP100YPL174C YHR050W-AQ05451 56 aa-0.48□□□□□ -2.49
NIP100YPL174C YLR255CO13574 117 aa-0.48□□□□□ -2.49
NIP100YPL174C SPC3Q12133 184 aa-0.48□□□□□ -2.49
NIP100YPL174C RPL36BO14455 100 aaKnown RBP-0.49□□□□□ -2.49
NIP100YPL174C RPL36AP05745 100 aaPredicted RBP-0.49□□□□□ -2.49
NIP100YPL174C RPS1AP33442 255 aaKnown RBP-0.49□□□□□ -2.49
NIP100YPL174C HSP10P38910 106 aa-0.49□□□□□ -2.49
NIP100YPL174C YDR524C-BQ3E6R4 66 aa-0.49□□□□□ -2.49
NIP100YPL174C YGL041C-BQ3E750 60 aa-0.49□□□□□ -2.49
NIP100YPL174C RUB1Q03919 77 aa-0.5□□□□□ -2.49
NIP100YPL174C FCF2Q12035 217 aaPredicted RBP-0.5□□□□□ -2.49
NIP100YPL174C YJR107C-AP0CT86 78 aa-0.5□□□□□ -2.49
NIP100YPL174C PET54P10834 293 aa-0.5□□□□□ -2.49
NIP100YPL174C YBL044WP38194 122 aa-0.5□□□□□ -2.49
NIP100YPL174C ATX1P38636 73 aa-0.5□□□□□ -2.49
NIP100YPL174C RPC10P40422 70 aa-0.51□□□□□ -2.49
NIP100YPL174C MLP1Q02455 1875 aaKnown RBP-0.51□□□□□ -2.49
NIP100YPL174C YHR173CP38864 112 aa-0.51□□□□□ -2.49
NIP100YPL174C YMR082CQ04276 118 aa-0.51□□□□□ -2.49
NIP100YPL174C YBR090CP38253 122 aa-0.52□□□□□ -2.49
NIP100YPL174C YGR039WP53225 103 aa-0.52□□□□□ -2.49
NIP100YPL174C MRPS12P53732 153 aa-0.52□□□□□ -2.49
NIP100YPL174C YBR016WP38216 128 aa-0.52□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms