RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YFL051CP43552 160 aa2.09□□□□□ -2.07
MSH2YOL090W AVO2Q04749 426 aa2.09□□□□□ -2.07
MSH2YOL090W HRT1Q08273 121 aa2.09□□□□□ -2.07
MSH2YOL090W YDR029WQ12111 104 aa2.09□□□□□ -2.07
MSH2YOL090W FIT1Q04433 528 aa2.09□□□□□ -2.08
MSH2YOL090W YIL046W-AQ3E7Z4 54 aa2.09□□□□□ -2.08
MSH2YOL090W RRT15Q3E811 62 aa2.09□□□□□ -2.08
MSH2YOL090W TEL1P38110 2787 aa2.09□□□□□ -2.08
MSH2YOL090W RTC6O14464 93 aa2.08□□□□□ -2.08
MSH2YOL090W STF2P16965 84 aa2.08□□□□□ -2.08
MSH2YOL090W SRX1P36077 127 aa2.08□□□□□ -2.08
MSH2YOL090W PAU24P38155 120 aa2.08□□□□□ -2.08
MSH2YOL090W SVP26P38869 228 aa2.08□□□□□ -2.08
MSH2YOL090W BRP1P53194 125 aa2.08□□□□□ -2.08
MSH2YOL090W GRX5Q02784 150 aa2.08□□□□□ -2.08
MSH2YOL090W YDR114CQ04597 100 aa2.08□□□□□ -2.08
MSH2YOL090W YPR153WQ06537 140 aa2.08□□□□□ -2.08
MSH2YOL090W FIT3Q08907 204 aa2.08□□□□□ -2.08
MSH2YOL090W TOR2P32600 2474 aaKnown RBP2.08□□□□□ -2.08
MSH2YOL090W MDM35O60200 86 aa2.08□□□□□ -2.08
MSH2YOL090W HMRA1P0CY11 126 aa2.08□□□□□ -2.08
MSH2YOL090W FUN14P18411 198 aa2.08□□□□□ -2.08
MSH2YOL090W YKR045CP36138 183 aa2.08□□□□□ -2.08
MSH2YOL090W YER187WP40102 141 aa2.08□□□□□ -2.08
MSH2YOL090W YDL157CQ12082 118 aa2.08□□□□□ -2.08
MSH2YOL090W MRPL44P19956 98 aa2.08□□□□□ -2.08
MSH2YOL090W HSP150P32478 413 aa2.08□□□□□ -2.08
MSH2YOL090W HSP10P38910 106 aa2.08□□□□□ -2.08
MSH2YOL090W PEP8P40335 379 aa2.08□□□□□ -2.08
MSH2YOL090W YIL014C-AQ02598 104 aa2.08□□□□□ -2.08
MSH2YOL090W ECM31P38122 312 aa2.07□□□□□ -2.08
MSH2YOL090W IPT1P38954 527 aa2.07□□□□□ -2.08
MSH2YOL090W SWC7Q06707 132 aa2.07□□□□□ -2.08
MSH2YOL090W YPL261CQ08976 102 aa2.07□□□□□ -2.08
MSH2YOL090W RSM19P53733 91 aaPredicted RBP2.07□□□□□ -2.08
MSH2YOL090W SOD1P00445 154 aaKnown RBP2.06□□□□□ -2.08
MSH2YOL090W YHR022CP38763 256 aa2.06□□□□□ -2.08
MSH2YOL090W IGO1P53897 168 aa2.06□□□□□ -2.08
MSH2YOL090W YPL067CQ02754 198 aa2.06□□□□□ -2.08
MSH2YOL090W NAT5Q08689 176 aa2.06□□□□□ -2.08
MSH2YOL090W YOS1Q3E834 85 aa2.06□□□□□ -2.08
MSH2YOL090W RPS25BP0C0T4 108 aaKnown RBP2.06□□□□□ -2.08
MSH2YOL090W YEL014CP39999 101 aa2.06□□□□□ -2.08
MSH2YOL090W EMC5P40540 141 aa2.06□□□□□ -2.08
MSH2YOL090W YJL144WP47009 104 aa2.06□□□□□ -2.08
MSH2YOL090W RPS25AQ3E792 108 aaPredicted RBP2.06□□□□□ -2.08
MSH2YOL090W MSL1P40567 111 aaPredicted RBP2.05□□□□□ -2.08
MSH2YOL090W HYR1P40581 163 aaKnown RBP2.05□□□□□ -2.08
MSH2YOL090W CYT2Q00873 224 aa2.05□□□□□ -2.08
MSH2YOL090W YLR296WQ05898 108 aa2.05□□□□□ -2.08
MSH2YOL090W CDC39P25655 2108 aaKnown RBP2.05□□□□□ -2.08
MSH2YOL090W YMR082CQ04276 118 aa2.05□□□□□ -2.08
MSH2YOL090W GPI11Q06636 219 aa2.05□□□□□ -2.08
MSH2YOL090W YMR030W-AQ3E760 96 aa2.05□□□□□ -2.08
MSH2YOL090W COA6Q3E846 104 aa2.05□□□□□ -2.08
MSH2YOL090W MRPL11P36521 249 aaPredicted RBP2.04□□□□□ -2.08
MSH2YOL090W HUR1P45820 110 aa2.04□□□□□ -2.08
MSH2YOL090W DAD1Q12248 94 aa2.04□□□□□ -2.08
MSH2YOL090W PCC1Q3E833 88 aa2.04□□□□□ -2.08
MSH2YOL090W PAU19P0CE85 124 aa2.04□□□□□ -2.08
MSH2YOL090W PAU3P25610 124 aa2.04□□□□□ -2.08
MSH2YOL090W YIR020CP40575 100 aa2.04□□□□□ -2.08
MSH2YOL090W SML1Q04964 104 aa2.04□□□□□ -2.08
MSH2YOL090W YLR194CQ05777 254 aa2.04□□□□□ -2.08
MSH2YOL090W RPL13BP40212 199 aaKnown RBP2.03□□□□□ -2.08
MSH2YOL090W EMC6Q12431 108 aa2.03□□□□□ -2.08
MSH2YOL090W OST5Q92316 86 aa2.03□□□□□ -2.08
MSH2YOL090W RPB7P34087 171 aa2.02□□□□□ -2.09
MSH2YOL090W ATG8P38182 117 aaRIP-Chip data2.02□□□□□ -2.09not detected
MSH2YOL090W ACC1Q00955 2233 aaKnown RBP2.02□□□□□ -2.09
MSH2YOL090W COX23P38824 151 aa2.02□□□□□ -2.09
MSH2YOL090W SEN1Q00416 2231 aaKnown RBP2.02□□□□□ -2.09
MSH2YOL090W BEM2P39960 2167 aaKnown RBP2.01□□□□□ -2.09
MSH2YOL090W SNN1P48232 102 aa2.01□□□□□ -2.09
MSH2YOL090W MIX14Q04341 121 aa2.01□□□□□ -2.09
MSH2YOL090W FMP27Q06179 2628 aa2.01□□□□□ -2.09
MSH2YOL090W BRR2P32639 2163 aaKnown RBP2.01□□□□□ -2.09
MSH2YOL090W ECM12O13529 151 aa2.01□□□□□ -2.09
MSH2YOL090W STT4P37297 1900 aa2□□□□□ -2.09
MSH2YOL090W PAU16P35994 123 aa2□□□□□ -2.09
MSH2YOL090W PAU15P40585 124 aa2□□□□□ -2.09
MSH2YOL090W QCR8P08525 94 aa2□□□□□ -2.09
MSH2YOL090W YEL008WP40001 126 aa2□□□□□ -2.09
MSH2YOL090W VMA21P41806 77 aa2□□□□□ -2.09
MSH2YOL090W RPL22BP56628 122 aaKnown RBP2□□□□□ -2.09
MSH2YOL090W SRB6P32570 121 aa1.99□□□□□ -2.09
MSH2YOL090W DSE2P38844 325 aa1.99□□□□□ -2.09
MSH2YOL090W YDR042CQ03205 200 aa1.99□□□□□ -2.09
MSH2YOL090W MHF1Q3E835 90 aa1.99□□□□□ -2.09
MSH2YOL090W YJL197C-AP0C5P0 93 aa1.99□□□□□ -2.09
MSH2YOL090W CWP2P43497 92 aa1.99□□□□□ -2.09
MSH2YOL090W PAU5P43575 122 aa1.98□□□□□ -2.09
MSH2YOL090W TAR1Q8TGM6 124 aa1.98□□□□□ -2.09
MSH2YOL090W RPL36BO14455 100 aaKnown RBP1.98□□□□□ -2.09
MSH2YOL090W RPL36AP05745 100 aaPredicted RBP1.98□□□□□ -2.09
MSH2YOL090W YHR213WP0CI67 198 aa1.98□□□□□ -2.09
MSH2YOL090W FMT1P32785 401 aa1.98□□□□□ -2.09
MSH2YOL090W DAN1P47178 298 aa1.98□□□□□ -2.09
MSH2YOL090W RGM1Q00453 211 aa1.98□□□□□ -2.09
MSH2YOL090W MET31Q03081 177 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms